RPS15 Rps15p [Saccharomyces cerevisiae S288c] - Gene

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Summary

Gene symbol: RPS15
Gene description: Rps15p
Primary source: SGD:S000005400
Locus tag: YOL040C
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Saccharomyces cerevisiae S288c (strain: S288c)
Lineage: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as: RPS21

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Genomic context

Sequence :: Chromosome: XV; NC_001147.6 (253149..253577, complement)

See RPS15 in MapViewer

Chromosome XV - NC_001147.6 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Interactions

Products	Interactant	Other Gene	Source	Pubs	Description
BioGRID:34362	BioGRID:35876	BRE5	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31029	BUD23	BioGRID	PubMed	Synthetic Lethality
BioGRID:34362	BioGRID:36484	CIC1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35002	DSN1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32186	FIN1	BioGRID	PubMed	Affinity Capture-Western
BioGRID:34362	BioGRID:35584	GIS2	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33993	LTV1	BioGRID	PubMed	Reconstituted Complex
BioGRID:34362	BioGRID:33129	NAB2	BioGRID	PubMed	Affinity Capture-RNA
BioGRID:34362	BioGRID:35703	NAF1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31838	NHP2	BioGRID	PubMed	Synthetic Lethality
BioGRID:34362	BioGRID:35101	ORC1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33232	PUF4	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33033	RAI1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35629	RIO2	BioGRID	PubMed	Affinity Capture-MS; Reconstituted Complex
BioGRID:34362	BioGRID:33327	RPL11B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36424	RPL14B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31303	RPL15A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35754	RPL16B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33959	RPL17A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33584	RPL17B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32671	RPL19B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35421	RPL20A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:34248	RPL25	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33279	RPL26B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32524	RPL27B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33147	RPL28	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31189	RPL29	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31187	RPL2A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:34970	RPL2B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:34462	RPL3	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31986	RPL31A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32611	RPL32	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31925	RPL35B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35372	RPL36A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36574	RPL42B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35068	RPL6A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31706	RPL6B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33105	RPL9A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36458	RPN1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36634	RPN10	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31152	RPN11	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32119	RPS13	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31978	RPS16B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32502	RPS17B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31700	RPS1A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35103	RPS1B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33128	RPS2	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36408	RPS20	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33363	RPS23A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36817	RPS24A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35653	RPS3	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:31553	RPS30A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33879	RPS5	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36091	RPS6A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32879	RPS6B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:34494	RPS7A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35728	RPS7B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:32887	RPS9B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:33323	SLX9	BioGRID	PubMed	Synthetic Lethality
BioGRID:34362	BioGRID:31147	SPB4	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36856	SWI4	BioGRID	PubMed	Synthetic Lethality
BioGRID:34362	BioGRID:31215	UBI4	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:36901	UBP3	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34362	BioGRID:35268	UTP15	BioGRID	PubMed	Synthetic Lethality

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General gene information

Homology

Homologs of the RPS15 gene: The RPS15 gene is conserved in human, chimpanzee, dog, cow, mouse, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.pombe, S.cerevisiae, K.lactis, E.gossypii, M.grisea, N.crassa, A.thaliana, rice, and P.falciparum.

Pathways from BioSystems

Cap-dependent Translation Initiation, organism-specific biosystem (from REACTOME)
Cap-dependent Translation Initiation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Eukaryotic Translation Elongation, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Elongation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Eukaryotic Translation Initiation, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Initiation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Formation of a pool of free 40S subunits, organism-specific biosystem (from REACTOME)
Formation of a pool of free 40S subunits, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Formation of the ternary complex, and subsequently, the 43S complex, organism-specific biosystem (from REACTOME)
Formation of the ternary complex, and subsequently, the 43S complex, organism-specific biosystemcomputationally inferred pathway (not manually curated)
GTP hydrolysis and joining of the 60S ribosomal subunit, organism-specific biosystem (from REACTOME)
GTP hydrolysis and joining of the 60S ribosomal subunit, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Gene Expression, organism-specific biosystem (from REACTOME)
Gene Expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
L13a-mediated translational silencing of Ceruloplasmin expression, organism-specific biosystem (from REACTOME)
L13a-mediated translational silencing of Ceruloplasmin expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Metabolism of proteins, organism-specific biosystem (from REACTOME)
Metabolism of proteins, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Peptide chain elongation, organism-specific biosystem (from REACTOME)
Peptide chain elongation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Ribosomal scanning and start codon recognition, organism-specific biosystem (from REACTOME)
Ribosomal scanning and start codon recognition, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Ribosome, organism-specific biosystem (from KEGG)
Ribosome, organism-specific biosystem
Ribosome
Ribosome, conserved biosystem (from KEGG)
Ribosome, conserved biosystem
Ribosome
Ribosome, eukaryotes, organism-specific biosystem (from KEGG)
Ribosome, eukaryotes, organism-specific biosystemStructural complex; Genetic information processing; Ribosome
SRP-dependent cotranslational protein targeting to membrane, organism-specific biosystem (from REACTOME)
SRP-dependent cotranslational protein targeting to membrane, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Translation, organism-specific biosystem (from REACTOME)
Translation, organism-specific biosystemcomputationally inferred pathway (not manually curated)

Gene Ontology Provided by GO

Function	Evidence Code	Pubs
RNA binding	IEA Inferred from Electronic Annotation more info
structural constituent of ribosome	IEA Inferred from Electronic Annotation more info
structural constituent of ribosome	NAS Non-traceable Author Statement more info	PubMed

Process	Evidence Code	Pubs
cytoplasmic translation	NAS Non-traceable Author Statement more info	PubMed
rRNA export from nucleus	IMP Inferred from Mutant Phenotype more info	PubMed
ribosome biogenesis	IEA Inferred from Electronic Annotation more info
translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
cytoplasm	IEA Inferred from Electronic Annotation more info
cytosolic small ribosomal subunit	NAS Non-traceable Author Statement more info	PubMed
ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
ribosome	IEA Inferred from Electronic Annotation more info
small ribosomal subunit	IEA Inferred from Electronic Annotation more info

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General protein information

Names: Rps15p

NP_014602.1

Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S19 and rat S15 ribosomal proteins

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NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_001147.6

Range

253149..253577, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001183294.1 → NP_014602.1 Rps15p [Saccharomyces cerevisiae S288c]

Status: PROVISIONAL

UniProtKB/Swiss-Prot

Q01855

Conserved Domains (2) summary

PRK04038
Location:16 – 142
Blast Score: 381

rps19p; 30S ribosomal protein S19P; Provisional

cl00350
Location:1 – 140
Blast Score: 540

Ribosomal_S19; Ribosomal protein S19