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    RPL25 Rpl25p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 853993, updated on 21-Jan-2012
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    Summary

    Gene symbol
    RPL25
    Gene description
    Rpl25p
    Primary source
    SGD:S000005487
    Locus tag
    YOL127W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: XV; NC_001147.6 (80348..81190)
    See RPL25 in MapViewer

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Vps68p Neighboring gene Ygk3p Neighboring gene Mdh2p Neighboring gene Trm13p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sites of ubiquitin attachment in Saccharomyces cerevisiae. Starita LM, et al. Proteomics, 2012 Jan. PMID 22106047.
    2. Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre-rRNA processing. Sahasranaman A, et al. EMBO J, 2011 Sep 16. PMID 21926967.
    3. A perturbed ubiquitin landscape distinguishes between ubiquitin in trafficking and in proteolysis. Ziv I, et al. Mol Cell Proteomics, 2011 May. PMID 21427232.
    4. Not4 E3 ligase contributes to proteasome assembly and functional integrity in part through Ecm29. Panasenko OO, et al. Mol Cell Biol, 2011 Apr. PMID 21321079.
    5. Saccharomyces cerevisiae Gis2 interacts with the translation machinery and is orthogonal to myotonic dystrophy type 2 protein ZNF9. Sammons MA, et al. Biochem Biophys Res Commun, 2011 Mar 4. PMID 21277287.

    See all (38) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. Rpl25p plays a critical role in the recruitment of SRP to the ribosome
      Title: Access to ribosomal protein Rpl25p by the signal recognition particle is required for efficient cotranslational translocation.
    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:34248 BioGRID:36440 ARD1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:34248 BioGRID:35292 ASC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35876 BRE5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34325 BRX1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31348 BUD20    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36484 CIC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32025 DBP10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35713 DBP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31544 DBP9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31243 DRS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35002 DSN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33966 EBP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36392 ECM29    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36142 EGD1    BioGRID  PubMed Affinity Capture-Western; Co-purification 
    BioGRID:34248 BioGRID:35223 ERB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35079 ERG13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32186 FIN1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:34248 BioGRID:31707 FPR4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32682 FUS3    BioGRID  PubMed Biochemical Activity 
    BioGRID:34248 BioGRID:35584 GIS2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35470 HAS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35923 HSP82    BioGRID  PubMed Two-hybrid 
    BioGRID:34248 BioGRID:36239 ISA2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36855 KAP123    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:34248 BioGRID:30927 KRR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31149 LOC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32842 MAK5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:34248 BioGRID:35703 NAF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35974 NIP7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36604 NMD3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:34248 BioGRID:34601 NOC2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31275 NOC3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36088 NOG1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35878 NOG2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34361 NOP12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35715 NOP15    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35762 NOP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36136 NOP4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33346 NOP7    BioGRID  PubMed Affinity Capture-MS; Synthetic Growth Defect 
    BioGRID:34248 BioGRID:33140 NSA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36736 NUG1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35101 ORC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35488 PSE1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:34248 BioGRID:33232 PUF4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32547 PUF6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36631 RIX1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:34248 BioGRID:35823 RLP7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36523 RPF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34212 RPF2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:34248 BioGRID:31349 RPL10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33327 RPL11B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32476 RPL12B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31979 RPL13A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35318 RPL13B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36424 RPL14B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31303 RPL15A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34858 RPL16A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35754 RPL16B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33959 RPL17A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33584 RPL17B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34281 RPL18A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35537 RPL18B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32671 RPL19B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35965 RPL1A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33117 RPL1B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35421 RPL20A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34700 RPL20B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32888 RPL21A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33215 RPL24A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33279 RPL26B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36437 RPL27A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32524 RPL27B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33147 RPL28    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31189 RPL29    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31187 RPL2A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34970 RPL2B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34462 RPL3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33216 RPL30    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31986 RPL31A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31663 RPL31B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32611 RPL32    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36040 RPL33A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31925 RPL35B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35372 RPL36A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35913 RPL36B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31588 RPL38    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36574 RPL42B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32733 RPL4A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32063 RPL4B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36050 RPL5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35068 RPL6A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31706 RPL6B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33174 RPL7A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35986 RPL7B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36389 RPL8A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31269 RPL8B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33105 RPL9A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31152 RPN11    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31602 RPP0    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34363 RPP2A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32443 RPP2B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32750 RPS11B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32119 RPS13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31014 RPS14A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34362 RPS15    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31978 RPS16B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32502 RPS17B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32505 RPS18A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31700 RPS1A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35103 RPS1B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33573 RPS22A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33363 RPS23A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36817 RPS24A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34923 RPS24B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33268 RPS25A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35653 RPS3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31553 RPS30A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33901 RPS4A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36637 RPS4B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33879 RPS5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36091 RPS6A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32879 RPS6B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34494 RPS7A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:35728 RPS7B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32629 RPS8A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36848 RPS8B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32887 RPS9B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32143 RRP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32472 RRP17    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33496 SDA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31850 SEC31    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36361 SKI3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32561 SMT3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31147 SPB4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31419 STM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32457 SXM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36193 TIF6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:31215 UBI4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:36901 UBP3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:34118 URB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:32441 YRA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34248 BioGRID:33535 ZUO1    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Homology

    • Homologs of the RPL25 gene: The RPL25 gene is conserved in chimpanzee, dog, cow, mouse, rat, S.pombe, S.cerevisiae, K.lactis, E.gossypii, M.grisea, and N.crassa.

    Pathways from BioSystems

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    RNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    ribosomal large subunit assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    intracellular IEA
    Inferred from Electronic Annotation
    more info
    		  
    ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Rpl25p
    NP_014514.1
    • Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarity to E. coli L23 and rat L23a ribosomal proteins; binds to 26S rRNA via a conserved C-terminal motif
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6

      Range
      80348..81190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183381.1 → NP_014514.1  Rpl25p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P04456
      Conserved Domains (2) summary
      cl00326
      Location:59 – 140
      Blast Score: 243
      Ribosomal_L23; Ribosomal protein L23
      pfam03939
      Location:24 – 54
      Blast Score: 113
      Ribosomal_L23eN; Ribosomal protein L23, N-terminal domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006948.2 DAA10657.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P04456.4 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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