YKR104W hypothetical protein [Saccharomyces cerevisiae S288c] - Gene

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Summary

Gene symbol: YKR104W
Gene description: hypothetical protein
Primary source: SGD:S000001812
Locus tag: YKR104W
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Saccharomyces cerevisiae S288c (strain: S288c)
Lineage: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as: NFT1

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Genomic context

Sequence :: Chromosome: XI; NC_001143.9 (656836..657756)

See YKR104W in MapViewer

Chromosome XI - NC_001143.9 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Interactions

Products	Interactant	Other Gene	Source	Pubs	Description
BioGRID:34235	BioGRID:35332	AIM36	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34350	AIM39	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:35292	ASC1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:31652	ATP10	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34530	BAG7	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34396	COQ10	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:35772	COX5A	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33335	DBF2	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32415	EAF1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32729	ETR1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:31482	FRE1	BioGRID	PubMed	PCA
BioGRID:34235	BioGRID:34243	GAS4	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33656	GSH1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34743	HAP5	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33831	HOC1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34321	IRA2	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33776	LSM8	BioGRID	PubMed	Two-hybrid
BioGRID:34235	BioGRID:35291	MGR3	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34624	MKK1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33886	MNS1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34123	MRT4	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33004	MTO1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:35707	NCS2	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33550	NUC1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32369	OMS1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:36903	PET122	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:35822	PET8	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33816	PTK2	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34274	RIB4	BioGRID	PubMed	Two-hybrid
BioGRID:34235	BioGRID:36395	RIM101	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:36101	RPL21B	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:30988	RVS161	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33181	SGF73	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32455	SHE9	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33136	SNF4	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33947	SRY1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:30951	STE50	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:35753	TOM7	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32176	TRM1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32136	VPS41	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:34891	XBP1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:32428	XRS2	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:35759	YDJ1	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33003	YGL235W	BioGRID	PubMed	Negative Genetic
BioGRID:34235	BioGRID:33808	YJR054W	BioGRID	PubMed	Negative Genetic

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General gene information

Gene Ontology Provided by GO

Function	Evidence Code	Pubs
ATP binding	IEA Inferred from Electronic Annotation more info
ATPase activity	IEA Inferred from Electronic Annotation more info
ATPase activity, coupled to transmembrane movement of substances	ISS Inferred from Sequence or Structural Similarity more info	PubMed
nucleoside-triphosphatase activity	IEA Inferred from Electronic Annotation more info
nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
ATP catabolic process	IEA Inferred from Electronic Annotation more info
transport	ISS Inferred from Sequence or Structural Similarity more info	PubMed

Component	Evidence Code	Pubs
integral to membrane	ISM Inferred from Sequence Model more info	PubMed
membrane	ISS Inferred from Sequence or Structural Similarity more info	PubMed

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General protein information

Names: hypothetical protein

NP_013030.1

Putative transporter of the multidrug resistance-associated protein (MRP) subfamily; contains a stop codon in S288C; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds

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NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_001143.9

Range

656836..657756

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001179894.1 → NP_013030.1 hypothetical protein YKR104W [Saccharomyces cerevisiae S288c]

Status: PROVISIONAL

UniProtKB/Swiss-Prot

P0CE69

Conserved Domains (2) summary

COG0410
Location:34 – 276
Blast Score: 256

LivF; ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]

cd03369
Location:27 – 270
Blast Score: 844

ABCC_NFT1; Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the ...