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    YJL107C hypothetical protein [ Saccharomyces cerevisiae S288c ]

    Gene ID: 853337, updated on 21-Jan-2012
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    Summary

    Gene symbol
    YJL107C
    Gene description
    hypothetical protein
    Primary source
    SGD:S000003643
    Locus tag
    YJL107C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: X; NC_001142.9 (218853..220016, complement)
    See YJL107C in MapViewer

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Gzf3p Neighboring gene Utp10p Neighboring gene Prm10p Neighboring gene Ime2p Neighboring gene Set4p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Scherrer T, et al. Genome Biol, 2011. PMID 21232131.
    2. The genetic landscape of a cell. Costanzo M, et al. Science, 2010 Jan 22. PMID 20093466.
    3. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    4. Diverse cellular functions of the Hsp90 molecular chaperone uncovered using systems approaches. McClellan AJ, et al. Cell, 2007 Oct 5. PMID 17923092.
    5. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Krogan NJ, et al. Nature, 2006 Mar 30. PMID 16554755.

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:33649 BioGRID:35584 GIS2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:33649 BioGRID:35364 HSC82    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33649 BioGRID:35923 HSP82    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33649 BioGRID:32389 IRC3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33649 BioGRID:34692 ISW2    BioGRID  PubMed Negative Genetic 
    BioGRID:33649 BioGRID:33845 JSN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33649 BioGRID:31731 MTW1    BioGRID  PubMed Negative Genetic 
    BioGRID:33649 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:33649 BioGRID:34654 RBL2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33649 BioGRID:35250 RCO1    BioGRID  PubMed Negative Genetic 
    BioGRID:33649 BioGRID:33619 TIF2    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Names
    hypothetical protein
    NP_012428.1
    • hypothetical protein; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9

      Range
      218853..220016, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181540.1 → NP_012428.1  hypothetical protein YJL107C [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P42947
      Conserved Domains (2) summary
      COG2966
      Location:120 – 378
      Blast Score: 421
      COG2966; Uncharacterized conserved protein [Function unknown]
      cl01118
      Location:350 – 378
      Blast Score: 122
      DUF1212; Protein of unknown function (DUF1212)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006943.2 DAA08693.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P42947.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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