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NUP57 Nup57p [ Saccharomyces cerevisiae S288c ]

Gene ID: 853016, updated on 15-Jul-2014
Gene symbol
NUP57
Gene description
Nup57p
Primary source
SGD:S000003351
Locus tag
YGR119C
Gene type
protein coding
RNA name
Nup57p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See NUP57 in MapViewer
Location:
chromosome: VII
Exon count :
1
Sequence:
Chromosome: VII; NC_001139.9 (728046..729671, complement)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ribosomal 40S subunit protein S23A Neighboring gene Cog2p Neighboring gene tRNA

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
nucleocytoplasmic transporter activity IGI
Inferred from Genetic Interaction
more info
PubMed 
nucleocytoplasmic transporter activity IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of nuclear pore IDA
Inferred from Direct Assay
more info
PubMed 
structural constituent of nuclear pore IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
NLS-bearing protein import into nucleus IGI
Inferred from Genetic Interaction
more info
PubMed 
mRNA transport IEA
Inferred from Electronic Annotation
more info
 
nuclear pore organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein import into nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein targeting to nuclear inner membrane IGI
Inferred from Genetic Interaction
more info
 
protein transport IEA
Inferred from Electronic Annotation
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane ISM
Inferred from Sequence Model
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear pore IDA
Inferred from Direct Assay
more info
PubMed 
nuclear pore IEA
Inferred from Electronic Annotation
more info
 
nuclear pore central transport channel IDA
Inferred from Direct Assay
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Nup57p
NP_011634.1
  • FG-nucleoporin component of central core of the nuclear pore complex (NPC); contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup49p)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 

    Range
    728046..729671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181248.1NP_011634.1  Nup57p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_011634.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P48837
    Conserved Domains (2) summary
    pfam13634
    Location:136235
    Blast Score: 125
    Nucleoporin_FG; Nucleoporin FG repeat region
    pfam13874
    Location:325464
    Blast Score: 477
    Nup54; Nucleoporin complex subunit 54

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