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YGR038C-A gag protein [ Saccharomyces cerevisiae S288c ]

Gene ID: 852929, updated on 7-Dec-2014
Gene symbol
YGR038C-A
Gene description
gag protein
Primary source
SGD:S000007407
Locus tag
YGR038C-A
Gene type
protein coding
RNA name
gag protein
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See YGR038C-A in MapViewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (566145..567467, complement)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene Orm1p Neighboring gene gag-pol fusion protein Neighboring gene mitogen-activated serine/threonine-protein kinase KSS1 Neighboring gene Bud9p

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
transposition, RNA-mediated ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
retrotransposon nucleocapsid ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Names
gag protein
NP_058161.1
  • Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 

    Range
    566145..567467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184433.1NP_058161.1  gag protein [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_058161.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q12485
    Conserved Domains (1) summary
    pfam01021
    Location:17114
    TYA; TYA transposon protein