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    VMA7 Vma7p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 852903, updated on 4-Feb-2012
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    Summary

    Gene symbol
    VMA7
    Gene description
    Vma7p
    Primary source
    SGD:S000003252
    Locus tag
    YGR020C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: VII; NC_001139.9 (526973..527329, complement)
    See VMA7 in MapViewer

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Uga1p Neighboring gene hypothetical protein Neighboring gene Mtl1p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sites of ubiquitin attachment in Saccharomyces cerevisiae. Starita LM, et al. Proteomics, 2012 Jan. PMID 22106047.
    2. A global protein kinase and phosphatase interaction network in yeast. Breitkreutz A, et al. Science, 2010 May 21. PMID 20489023.
    3. Alterations in DNA replication and histone levels promote histone gene amplification in Saccharomyces cerevisiae. Libuda DE, et al. Genetics, 2010 Apr. PMID 20139344.
    4. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    5. A different conformation for EGC stator subcomplex in solution and in the assembled yeast V-ATPase: possible implications for regulatory disassembly. Diepholz M, et al. Structure, 2008 Dec 10. PMID 19081055.

    See all (32) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:33262 BioGRID:33282 ACB1    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:31107 ACT1    BioGRID  PubMed Synthetic Haploinsufficiency 
    BioGRID:33262 BioGRID:32503 ADA2    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:33675 ARP4    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:31987 BRE1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:33931 CNB1    BioGRID  PubMed Synthetic Lethality 
    BioGRID:33262 BioGRID:31122 EPL1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:32903 FTH1    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:33226 GET1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:36828 GET2    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:32277 HTA1    BioGRID  PubMed Negative Genetic 
    BioGRID:33262 BioGRID:32276 HTB1    BioGRID  PubMed Negative Genetic 
    BioGRID:33262 BioGRID:33053 KEX1    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:36125 LGE1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:34139 MEH1    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:33262 BioGRID:35573 PIK1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:33239 PMC1    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:33189 RAD6    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:35630 RTT106    BioGRID  PubMed Synthetic Lethality 
    BioGRID:33262 BioGRID:31249 RTT109    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:33608 SNA3    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:31940 SNA4    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:35230 STV1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:33262 BioGRID:31215 UBI4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33262 BioGRID:36717 VAC8    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:31859 VMA1    BioGRID  PubMed Affinity Capture-MS; Co-fractionation 
    BioGRID:33262 BioGRID:36471 VMA10    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Co-fractionation 
    BioGRID:33262 BioGRID:36214 VMA13    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; PCA 
    BioGRID:33262 BioGRID:32828 VMA2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33262 BioGRID:33348 VMA21    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:36492 VMA22    BioGRID  PubMed Two-hybrid 
    BioGRID:33262 BioGRID:34716 VMA4    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:33262 BioGRID:34052 VMA5    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:31705 VMA6    BioGRID  PubMed Affinity Capture-MS; PCA 
    BioGRID:33262 BioGRID:36678 VMA8    BioGRID  PubMed Affinity Capture-MS; Co-fractionation; PCA 
    BioGRID:33262 BioGRID:33349 VOA1    BioGRID  PubMed PCA 
    BioGRID:33262 BioGRID:34659 VPH1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Co-fractionation; PCA 
    BioGRID:33262 BioGRID:31363 XDJ1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33262 BioGRID:33616 YAK1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33262 BioGRID:35983 YIG1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:33262 BioGRID:36525 YNG2    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:33262 BioGRID:31529 YPT6    BioGRID  PubMed Synthetic Lethality 
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    General gene information

    Homology

    • Homologs of the VMA7 gene: The VMA7 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, zebrafish, fruit fly, mosquito, C.elegans, S.pombe, S.cerevisiae, K.lactis, E.gossypii, M.grisea, N.crassa, A.thaliana, rice, and P.falciparum.

    Pathways from BioSystems

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    hydrogen ion transporting ATP synthase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		  
    proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		  
    proton-transporting ATPase activity, rotational mechanism TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    ATP hydrolysis coupled proton transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    proton transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    vacuolar acidification TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    fungal-type vacuole membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 
    integral to membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    proton-transporting V-type ATPase, V1 domain IEA
    Inferred from Electronic Annotation
    more info
    		  
    proton-transporting two-sector ATPase complex, catalytic domain IEA
    Inferred from Electronic Annotation
    more info
    		  
    vacuolar proton-transporting V-type ATPase, V1 domain TAS
    Traceable Author Statement
    more info
    		 PubMed 
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    General protein information

    Names
    Vma7p
    NP_011534.1
    • Subunit F of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9

      Range
      526973..527329, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181149.1 → NP_011534.1  Vma7p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P39111
      Conserved Domains (1) summary
      cl00632
      Location:1 – 118
      Blast Score: 461
      ATP-synt_F; ATP synthase (F/14-kDa) subunit
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006941.2 DAA08116.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P39111.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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