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    MUD1 Mud1p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 852416, updated on 21-Jan-2012
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    Summary

    Gene symbol
    MUD1
    Gene description
    Mud1p
    Primary source
    SGD:S000000323
    Locus tag
    YBR119W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: II; NC_001134.8 (479338..480323)
    See MUD1 in MapViewer

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene Tkl2p Neighboring gene Tef2p Neighboring gene Cbp6p Neighboring gene Grs1p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Cotranscriptional spliceosome assembly and splicing are independent of the Prp40p WW domain. Görnemann J, et al. RNA, 2011 Dec. PMID 22020974.
    2. Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing. Mishra SK, et al. Nature, 2011 May 25. PMID 21614000.
    3. Composition of yeast snRNPs and snoRNPs in the absence of trimethylguanosine caps reveals nuclear cap binding protein as a gained U1 component implicated in the cold-sensitivity of tgs1Δ cells. Schwer B, et al. Nucleic Acids Res, 2011 Aug. PMID 21558325.
    4. Multiple Myo4 motors enhance ASH1 mRNA transport in Saccharomyces cerevisiae. Chung S, et al. J Cell Biol, 2010 May 17. PMID 20457760.
    5. Mutational analyses of trimethylguanosine synthase (Tgs1) and Mud2: proteins implicated in pre-mRNA splicing. Chang J, et al. RNA, 2010 May. PMID 20360394.

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:32821 BioGRID:32628 AAR2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34946 AGE2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31891 AIR2    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:33639 ASF1    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:35876 BRE5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:36231 BRR1    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:32821 BioGRID:36925 BRR2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31117 CAK1    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:36005 CBC2    BioGRID  PubMed Affinity Capture-MS; Negative Genetic; Synthetic Lethality 
    BioGRID:32821 BioGRID:31446 CBF5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35210 CCS1    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:34278 CDC33    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32219 CDC37    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:34954 CST6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35419 CUS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:36115 CWC27    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:34599 DED1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32256 EBS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35305 ECM16    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:33453 ELP2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36607 ENO2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:32168 FOB1    BioGRID  PubMed Two-hybrid 
    BioGRID:32821 BioGRID:31707 FPR4    BioGRID  PubMed Two-hybrid 
    BioGRID:32821 BioGRID:35812 HEF3    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:32665 HEK2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:32821 BioGRID:36054 HHO1    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:35468 HSH155    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34705 HSH49    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31691 IMD3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34293 INO4    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:35610 JJJ1    BioGRID  PubMed Two-hybrid 
    BioGRID:32821 BioGRID:31610 KAP95    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:33080 KEM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35972 LEA1    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:32821 BioGRID:32008 LHP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:36554 LSM12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31697 LSM3    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31742 LTE1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:32821 BioGRID:31973 LUC7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34132 MET14    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:34226 MLP1    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:35541 MON2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31388 MSL5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32821 MUD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34057 MUD2    BioGRID  PubMed Affinity Capture-MS; Negative Genetic; Synthetic Lethality 
    BioGRID:32821 BioGRID:31737 MYO4    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:32821 BioGRID:35703 NAF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35256 NAM7    BioGRID  PubMed Affinity Capture-MS; Phenotypic Enhancement 
    BioGRID:32821 BioGRID:36521 NAM8    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:32821 BioGRID:32040 NOP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32489 NPL3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Co-localization 
    BioGRID:32821 BioGRID:33102 NUT1    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36918 PAB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31052 PAT1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:33430 PBP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32680 POP8    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:35153 PPZ1    BioGRID  PubMed Two-hybrid 
    BioGRID:32821 BioGRID:32016 PRP11    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31217 PRP19    BioGRID  PubMed Affinity Capture-MS; Co-purification 
    BioGRID:32821 BioGRID:32294 PRP28    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:33334 PRP31    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35122 PRP39    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34120 PRP40    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32286 PRP42    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31734 PRP45    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32756 PRP6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:36599 PRP8    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32026 PRP9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31784 PTA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:36219 PUF2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31315 RIC1    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:35238 RIM9    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31921 RPO21    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36451 RPS27B    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36497 RRP3    BioGRID  PubMed Two-hybrid 
    BioGRID:32821 BioGRID:35119 RSE1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35451 SCS7    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31536 SEC22    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:34916 SEC28    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:33461 SER2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:33591 SET2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31600 SGD1    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:34005 SHE2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:32821 BioGRID:32831 SHE3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:32821 BioGRID:35603 SIN4    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36764 SMB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31642 SMC6    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:33316 SMD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31543 SMD2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31416 SMD3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34555 SME1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:31129 SMX2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:36354 SMX3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34931 SNP1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:32821 BioGRID:33965 SNU114    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:32821 BioGRID:32291 SNU56    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:34697 SNU66    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Negative Genetic 
    BioGRID:32821 BioGRID:33256 SNU71    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35644 SRP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32498 SSN2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36137 SSN3    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:35302 STO1    BioGRID  PubMed Affinity Capture-MS; Synthetic Lethality 
    BioGRID:32821 BioGRID:32874 SWD3    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:33585 SWI3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35830 SWM2    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:35646 SWT21    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:33377 SYF2    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:36026 TGS1    BioGRID  PubMed Negative Genetic; Synthetic Growth Defect 
    BioGRID:32821 BioGRID:33414 TIF4631    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:33199 TIF4632    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:35447 TMA23    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36901 UBP3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:32821 BioGRID:32257 UME6    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:36710 YEL020C    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:33336 YGR093W    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:31562 YHC1    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:32821 BioGRID:34155 YKR023W    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:31421 YLR152C    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:35482 YME2    BioGRID  PubMed Positive Genetic 
    BioGRID:32821 BioGRID:31529 YPT6    BioGRID  PubMed Negative Genetic 
    BioGRID:32821 BioGRID:32441 YRA1    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    RNA binding IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    U1 snRNA binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		  
    mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    nuclear mRNA splicing, via spliceosome IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    U1 snRNP IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    U2-type prespliceosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Mud1p
    NP_009677.1
    • U1 snRNP A protein, homolog of human U1-A; involved in nuclear mRNA splicing
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8

      Range
      479338..480323
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178467.1 → NP_009677.1  TPA: Mud1p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P32605
      Conserved Domains (1) summary
      cl02586
      Location:229 – 281
      Blast Score: 104
      RRM; RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006936.2 DAA07237.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P32605.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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