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    SNA4 Sna4p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 851434, updated on 4-Feb-2012
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    Summary

    Gene symbol
    SNA4
    Gene description
    Sna4p
    Primary source
    SGD:S000002281
    Locus tag
    YDL123W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: IV; NC_001136.10 (241418..241840)
    See SNA4 in MapViewer

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Hnt1p Neighboring gene hypothetical protein Neighboring gene Ubp1p Neighboring gene hypothetical protein

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sites of ubiquitin attachment in Saccharomyces cerevisiae. Starita LM, et al. Proteomics, 2012 Jan. PMID 22106047.
    2. The genetic landscape of a cell. Costanzo M, et al. Science, 2010 Jan 22. PMID 20093466.
    3. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    4. Dual sorting of the Saccharomyces cerevisiae vacuolar protein Sna4p. Pokrzywa W, et al. Eukaryot Cell, 2009 Mar. PMID 19168755.
    5. Distinct roles for Khd1p in the localization and expression of bud-localized mRNAs in yeast. Hasegawa Y, et al. RNA, 2008 Nov. PMID 18805955.

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. Two motifs allows Sna4p to localize to both the vacuolar membrane and the lumen.
      Title: Dual sorting of the Saccharomyces cerevisiae vacuolar protein Sna4p.
    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:31940 BioGRID:35002 DSN1    BioGRID  PubMed Negative Genetic 
    BioGRID:31940 BioGRID:32903 FTH1    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:35083 GTR1    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:33415 GTR2    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:32665 HEK2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:31940 BioGRID:36528 HXT1    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:36038 KES1    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:34139 MEH1    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:31940 BioGRID:33223 PIB2    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:33239 PMC1    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:36869 RSP5    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Protein-peptide; Reconstituted Complex 
    BioGRID:31940 BioGRID:34385 TLG2    BioGRID  PubMed Co-purification 
    BioGRID:31940 BioGRID:31215 UBI4    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:31940 BioGRID:36717 VAC8    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:36214 VMA13    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:33262 VMA7    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:36678 VMA8    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:33606 VPS35    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:34468 VPS5    BioGRID  PubMed PCA 
    BioGRID:31940 BioGRID:31267 YBT1    BioGRID  PubMed PCA 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    fungal-type vacuole lumen IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    fungal-type vacuole lumen IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    fungal-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    fungal-type vacuole membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    integral to membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    vacuolar membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Sna4p
    NP_010160.1
    • hypothetical protein, localized to the vacuolar outer membrane; predicted to be palmitoylated
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10

      Range
      241418..241840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180182.1 → NP_010160.1  Sna4p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q07549
      Conserved Domains (1) summary
      cl00431
      Location:8 – 63
      Blast Score: 138
      Pmp3; Proteolipid membrane potential modulator
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006938.2 DAA11737.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q07549.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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