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CNE1 calnexin [ Saccharomyces cerevisiae S288c ]

Gene ID: 851241, updated on 16-Jul-2016
Gene symbol
CNE1
Gene description
calnexin
Primary source
SGD:S000000054
Locus tag
YAL058W
Gene type
protein coding
RNA name
calnexin
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
FUN48
See CNE1 in Map Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_001133.9 (37464..38972)

Chromosome I - NC_001133.9Genomic Context describing neighboring genes Neighboring gene (R,R)-butanediol dehydrogenase Neighboring gene Ecm1p Neighboring gene Gpb2p Neighboring gene ubiquitin-protein transferase activating protein PEX22

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
unfolded protein binding IDA
Inferred from Direct Assay
more info
PubMed 
unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
unfolded protein binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
unfolded protein binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
ER-associated ubiquitin-dependent protein catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein folding IEA
Inferred from Electronic Annotation
more info
 
protein folding IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of endoplasmic reticulum membrane IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Names
calnexin
NP_009343.1
  • Calnexin; integral membrane ER chaperone involved in folding and quality control of glycoproteins; chaperone activity is inhibited by Mpd1p, with which Cne1p interacts; 24% identical to mammalian calnexin; Ca+ binding not yet shown in yeast

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001133.9 Reference assembly

    Range
    37464..38972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178200.1NP_009343.1  calnexin [Saccharomyces cerevisiae S288c]

    See identical proteins and their annotated locations for NP_009343.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P27825
    Conserved Domains (1) summary
    pfam00262
    Location:33413
    Calreticulin; Calreticulin family