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    SAW1 Saw1p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 851206, updated on 8-Jan-2012
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    Summary

    Gene symbol
    SAW1
    Gene description
    Saw1p
    Primary source
    SGD:S000000025
    Locus tag
    YAL027W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: I; NC_001133.9 (94687..95472)
    See SAW1 in MapViewer

    Chromosome I - NC_001133.9Genomic Context describing neighboring genes Neighboring gene Myo4p Neighboring gene Frt2p Neighboring gene Drs2p Neighboring gene ncRNA Neighboring gene Mak16p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. The genetic landscape of a cell. Costanzo M, et al. Science, 2010 Jan 22. PMID 20093466.
    2. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    3. High-quality binary protein interaction map of the yeast interactome network. Yu H, et al. Science, 2008 Oct 3. PMID 18719252.
    4. Microarray-based genetic screen defines SAW1, a gene required for Rad1/Rad10-dependent processing of recombination intermediates. Li F, et al. Mol Cell, 2008 May 9. PMID 18471978.
    5. Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Collins SR, et al. Nature, 2007 Apr 12. PMID 17314980.

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. Data suggest that Saw1 targets Rad1/Rad10 to Rad52-coated recombination intermediates.
      Title: Microarray-based genetic screen defines SAW1, a gene required for Rad1/Rad10-dependent processing of recombination intermediates.
    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:31739 BioGRID:34317 ADH1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:34020 APN1    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:36225 ATG11    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:36344 BSP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:31688 CRN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:31235 DPS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:35305 ECM16    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:32559 GIN4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:32227 HMO1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:35718 INP52    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:30960 KCC4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:36173 LSP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:33144 MLC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:34312 MSH2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:31739 BioGRID:31064 MSH3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:31739 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:31739 BioGRID:32040 NOP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:36037 NOP53    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:31319 PDC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:32893 PGI1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:34897 PRK1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:31635 PSY3    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:36155 RAD1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:31739 BioGRID:35048 RAD10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:36841 RAD51    BioGRID  PubMed Reconstituted Complex 
    BioGRID:31739 BioGRID:35137 RAD52    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:31739 BioGRID:31793 RFA1    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:34612 RFC1    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:31012 RIM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:34682 RRS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:30988 RVS161    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:32449 RVS167    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:32017 SIR2    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:31739 BioGRID:34886 SLM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:32561 SMT3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:35586 TEX1    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:33434 TIM13    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:32162 TMS1    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:36788 TPA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:31739 BioGRID:33314 YGR071C    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:35281 YKU80    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:31421 YLR152C    BioGRID  PubMed Negative Genetic 
    BioGRID:31739 BioGRID:32441 YRA1    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    double-strand break repair via single-strand annealing, removal of nonhomologous ends IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    double-strand break repair via single-strand annealing, removal of nonhomologous ends IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    response to DNA damage stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Saw1p
    NP_009375.1
    • Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand break repair via single-strand annealing; green fluorescent protein (GFP)-fusion protein localizes to the nucleus
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001133.9

      Range
      94687..95472
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178172.1 → NP_009375.1  Saw1p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P39735
      Conserved Domains (1) summary
      pfam11561
      Location:1 – 243
      Blast Score: 501
      Saw1; Single strand annealing-weakened 1
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006935.2 DAA06961.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P39735.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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