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BDF1 Bdf1p [ Saccharomyces cerevisiae S288c ]

Gene ID: 851115, updated on 7-Sep-2014
Gene symbol
BDF1
Gene description
Bdf1p
Primary source
SGD:S000004391
Locus tag
YLR399C
Gene type
protein coding
RNA name
Bdf1p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See BDF1 in MapViewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (919536..921596, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene AAA family ATPase AFG2 Neighboring gene SKI complex RNA helicase subunit SKI2 Neighboring gene Dus3p Neighboring gene Sfp1p

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
TFIID-class transcription factor binding IDA
Inferred from Direct Assay
more info
PubMed 
TFIID-class transcription factor binding IPI
Inferred from Physical Interaction
more info
PubMed 
chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
core promoter binding IDA
Inferred from Direct Assay
more info
PubMed 
lysine-acetylated histone binding IDA
Inferred from Direct Assay
more info
 
Process Evidence Code Pubs
DNA repair IEA
Inferred from Electronic Annotation
more info
 
DNA repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
chromatin remodeling IPI
Inferred from Physical Interaction
more info
PubMed 
negative regulation of heterochromatin assembly IGI
Inferred from Genetic Interaction
more info
PubMed 
negative regulation of heterochromatin assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of histone exchange IMP
Inferred from Mutant Phenotype
more info
 
regulation of chromatin silencing at silent mating-type cassette IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of chromatin silencing at telomere IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription by chromatin organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
snRNA transcription IMP
Inferred from Mutant Phenotype
more info
PubMed 
sporulation resulting in formation of a cellular spore IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Swr1 complex IDA
Inferred from Direct Assay
more info
PubMed 
nuclear chromatin IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Bdf1p
NP_013503.1
  • Protein involved in transcription initiation; functions at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p; BDF1 has a paralog, BDF2, that arose from the whole genome duplication

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 

    Range
    919536..921596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182287.1NP_013503.1  Bdf1p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_013503.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P35817
    Conserved Domains (3) summary
    cd05499
    Location:318418
    Bromo_BDF1_2_II; Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat II. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect ...
    cd05500
    Location:149251
    Bromo_BDF1_2_I; Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect ...
    COG5076
    Location:1373
    COG5076; Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]