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UBI4 ubiquitin [ Saccharomyces cerevisiae S288c ]

Gene ID: 850620, updated on 6-Jul-2014
Gene symbol
UBI4
Gene description
ubiquitin
Primary source
SGD:S000003962
Locus tag
YLL039C
Gene type
protein coding
RNA name
ubiquitin
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
SCD2; UB14
See UBI4 in MapViewer
Location:
chromosome: XII
Exon count :
1
Sequence:
Chromosome: XII; NC_001144.5 (64062..65207, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase iron-sulfur protein subunit SDH2 Neighboring gene Vps13p Neighboring gene Ent4p Neighboring gene E3 ubiquitin-protein ligase PRP19

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
ATP-dependent protein binding TAS
Traceable Author Statement
more info
PubMed 
protein tag ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
DNA repair IEA
Inferred from Electronic Annotation
more info
 
ascospore formation TAS
Traceable Author Statement
more info
PubMed 
cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
protein deubiquitination TAS
Traceable Author Statement
more info
PubMed 
protein monoubiquitination TAS
Traceable Author Statement
more info
PubMed 
protein polyubiquitination TAS
Traceable Author Statement
more info
PubMed 
protein ubiquitination IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IC
Inferred by Curator
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
ubiquitin
NP_013061.1
  • Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 

    Range
    64062..65207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181859.1NP_013061.1  ubiquitin [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_013061.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CG63
    Conserved Domains (1) summary
    cd01803
    Location:176
    Blast Score: 382
    Ubiquitin; Ubiquitin

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