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ZDHHC12 zinc finger, DHHC-type containing 12 [ Homo sapiens (human) ]

Gene ID: 84885, updated on 26-Jun-2015
Official Symbol
ZDHHC12provided by HGNC
Official Full Name
zinc finger, DHHC-type containing 12provided by HGNC
Primary source
HGNC:HGNC:19159
See related
Ensembl:ENSG00000160446; HPRD:15709; Vega:OTTHUMG00000020756
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF400
Orthologs
See ZDHHC12 in Epigenomics, MapViewer
Location:
9q34.11
Exon count:
5
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 9 NC_000009.12 (128720869..128724141, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (131483148..131486451, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376287 Neighboring gene high mobility group AT-hook 1 pseudogene 4 Neighboring gene SET nuclear proto-oncogene Neighboring gene protein kinase N3 Neighboring gene uncharacterized LOC100506100 Neighboring gene zyg-11 related, cell cycle regulator Neighboring gene uncharacterized LOC105376288

NHGRI GWAS Catalog

Description
Genetic variants associated with disordered eating.
NHGRI GWA Catalog
Nine loci for ocular axial length identified through genome-wide association studies, including shared loci with refractive error.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Clone Names

  • FLJ14524, MGC13153, MGC54050

Gene Ontology Provided by GOA

Function Evidence Code Pubs
palmitoyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
protein-cysteine S-palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
peptidyl-L-cysteine S-palmitoylation IBA
Inferred from Biological aspect of Ancestor
more info
 
protein palmitoylation IDA
Inferred from Direct Assay
more info
PubMed 
protein targeting to membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
probable palmitoyltransferase ZDHHC12
Names
probable palmitoyltransferase ZDHHC12
DHHC-12
zinc finger DHHC domain-containing protein 12
zinc finger protein 400
zinc finger, DHHC domain containing 12
NP_116188.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032799.4NP_116188.2  probable palmitoyltransferase ZDHHC12

    See identical proteins and their annotated locations for NP_116188.2

    Status: VALIDATED

    Source sequence(s)
    BC009280, BC048251, BU506687
    Consensus CDS
    CCDS6909.1
    UniProtKB/Swiss-Prot
    Q96GR4
    Related
    ENSP00000361748, OTTHUMP00000022291, ENST00000372663, OTTHUMT00000054484
    Conserved Domains (1) summary
    pfam01529
    Location:64217
    zf-DHHC; DHHC palmitoyltransferase

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p2 Primary Assembly

    Range
    128720869..128724141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011519116.1XP_011517418.1  

    Conserved Domains (1) summary
    pfam01529
    Location:119220
    zf-DHHC; DHHC palmitoyltransferase
  2. XM_011519115.1XP_011517417.1  

    Conserved Domains (1) summary
    pfam01529
    Location:119272
    zf-DHHC; DHHC palmitoyltransferase
  3. XM_005252279.2XP_005252336.1  

    Conserved Domains (1) summary
    pfam01529
    Location:64165
    zf-DHHC; DHHC palmitoyltransferase

Alternate CHM1_1.1

Genomic

  1. NC_018920.2 Alternate CHM1_1.1

    Range
    131634114..131637374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)