These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_003601.3 → NP_003592.3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Status: REVIEWED
- Source sequence(s)
-
AB010882, AC139713, AK123439, AU132439
- Consensus CDS
-
CCDS3761.1
- UniProtKB/Swiss-Prot
-
O60264
- Related
- ENSP00000283131, OTTHUMP00000220293, ENST00000283131, OTTHUMT00000365077
- Conserved Domains (7) summary
-
- cd00046
Location:200 – 339
Blast Score: 220
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd00079
Location:474 – 605
Blast Score: 259
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- cd00167
Location:844 – 883
Blast Score: 93
- SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
- COG0513
Location:482 – 743
Blast Score: 109
- SrmB; Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]
- pfam00176
Location:183 – 463
Blast Score: 997
- SNF2_N; SNF2 family N-terminal domain
- pfam09110
Location:743 – 820
Blast Score: 200
- HAND; HAND
- pfam09111
Location:898 – 1008
Blast Score: 423
- SLIDE; SLIDE
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000004.11 Reference GRCh37.p5 Primary Assembly
- Range
- 144434616..144478642
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000136.1 Alternate HuRef
- Range
- 140164707..140208721
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)