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Fam126a family with sequence similarity 126, member A [ Mus musculus (house mouse) ]

Gene ID: 84652, updated on 28-May-2016
Official Symbol
Fam126aprovided by MGI
Official Full Name
family with sequence similarity 126, member Aprovided by MGI
Primary source
MGI:MGI:2149839
See related
Ensembl:ENSMUSG00000028995 Vega:OTTMUSG00000021289
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AB030242; Drctnnb1a
Orthologs
Location:
5; 5 A3
Exon count:
15
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 5 NC_000071.6 (23915276..24030780, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (23466749..23536501, complement)

Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2700038G22 gene Neighboring gene predicted gene, 42228 Neighboring gene small nucleolar RNA, C/D box 93 Neighboring gene predicted gene 9534 Neighboring gene predicted gene 6745 Neighboring gene ribosomal protein S10 pseudogene Neighboring gene kelch-like 7 Neighboring gene gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 pseudogene

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
establishment of protein localization to plasma membrane ISO
Inferred from Sequence Orthology
more info
 
myelination IMP
Inferred from Mutant Phenotype
more info
PubMed 
phosphatidylinositol phosphorylation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
PubMed 
cytosol ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
hyccin
Names
down-regulated by CTNNB1 protein A

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310471.1NP_001297400.1  hyccin isoform 2

    See identical proteins and their annotated locations for NP_001297400.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR and contains an alternate 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct, shorter C-terminus than isoform 1.
    Source sequence(s)
    AI429699, AK161265
    Consensus CDS
    CCDS80221.1
    UniProtKB/Swiss-Prot
    Q6P9N1
    Conserved Domains (1) summary
    pfam09790
    Location:20330
    Hyccin; Hyccin
  2. NM_053090.3NP_444320.2  hyccin isoform 1

    See identical proteins and their annotated locations for NP_444320.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC115786, AW046748, BC060692, BG081564, CJ102951, CJ244220
    Consensus CDS
    CCDS19113.1
    UniProtKB/Swiss-Prot
    Q6P9N1
    UniProtKB/TrEMBL
    A0A0R4J0A5
    Related
    ENSMUSP00000030849, OTTMUSP00000023563, ENSMUST00000030849, OTTMUST00000050470
    Conserved Domains (1) summary
    pfam09790
    Location:20330
    Hyccin; Hyccin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000071.6 Reference GRCm38.p3 C57BL/6J

    Range
    23915276..24030780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006535824.2XP_006535887.1  

    Related
    ENSMUSP00000099050, OTTMUSP00000023564, ENSMUST00000101513, OTTMUST00000050471
    Conserved Domains (1) summary
    pfam09790
    Location:20330
    Hyccin; Hyccin
  2. XM_011249798.1XP_011248100.1  

    See identical proteins and their annotated locations for XP_011248100.1

    UniProtKB/Swiss-Prot
    Q6P9N1
    UniProtKB/TrEMBL
    A0A0R4J0A5
    Conserved Domains (1) summary
    pfam09790
    Location:20330
    Hyccin; Hyccin
  3. XM_011249797.1XP_011248099.1  

    See identical proteins and their annotated locations for XP_011248099.1

    UniProtKB/Swiss-Prot
    Q6P9N1
    UniProtKB/TrEMBL
    A0A0R4J0A5
    Conserved Domains (1) summary
    pfam09790
    Location:20330
    Hyccin; Hyccin
  4. XM_006535822.2XP_006535885.1  

    UniProtKB/Swiss-Prot
    Q6P9N1
    Related
    ENSMUSP00000110761, OTTMUSP00000023565, ENSMUST00000115109, OTTMUST00000050473
    Conserved Domains (1) summary
    pfam09790
    Location:20330
    Hyccin; Hyccin

Alternate Mm_Celera

Genomic

  1. AC_000027.1 Alternate Mm_Celera

    Range
    20907460..20980419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)