These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_032169.1 RefSeqGene
- Range
- 5001..120248
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001257197.1 → NP_001244126.1 cullin-3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 5' coding region, but maintains the reading frame, comapred to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AB014517, AC073052, AK299644, BQ688156
- UniProtKB/Swiss-Prot
-
Q13618
- Conserved Domains (3) summary
-
- smart00182
Location:355 – 497
Blast Score: 563
- CULLIN; Cullin
- pfam00888
Location:23 – 600
Blast Score: 1494
- Cullin; Cullin family
- cl11186
Location:629 – 695
Blast Score: 281
- Cullin_Nedd8; Cullin protein neddylation domain
-
NM_001257198.1 → NP_001244127.1 cullin-3 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (3) is longer and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AB014517, AC073052, AK308496
- Conserved Domains (3) summary
-
- smart00182
Location:427 – 569
Blast Score: 561
- CULLIN; Cullin
- pfam00888
Location:40 – 672
Blast Score: 1626
- Cullin; Cullin family
- cl11186
Location:701 – 767
Blast Score: 282
- Cullin_Nedd8; Cullin protein neddylation domain
-
NM_003590.4 → NP_003581.1 cullin-3 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AB014517, AC073052, BQ688156
- Consensus CDS
-
CCDS2462.1
- UniProtKB/Swiss-Prot
-
Q13618
- Related
- ENSP00000264414, OTTHUMP00000164219, ENST00000264414, OTTHUMT00000256871
- Conserved Domains (3) summary
-
- smart00182
Location:421 – 563
Blast Score: 561
- CULLIN; Cullin
- pfam00888
Location:34 – 666
Blast Score: 1630
- Cullin; Cullin family
- cl11186
Location:695 – 761
Blast Score: 281
- Cullin_Nedd8; Cullin protein neddylation domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000002.11 Reference GRCh37.p5 Primary Assembly
- Range
- 225334869..225450110, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000134.1 Alternate HuRef
- Range
- 217186562..217300381, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)