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ABLIM2 actin binding LIM protein family, member 2 [ Homo sapiens (human) ]

Gene ID: 84448, updated on 12-Apr-2014
Official Symbol
ABLIM2provided by HGNC
Official Full Name
actin binding LIM protein family, member 2provided by HGNC
Primary source
HGNC:19195
See related
Ensembl:ENSG00000163995; MIM:612544; Vega:OTTHUMG00000057427
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Location :
4p16.1
Sequence :
Chromosome: 4; NC_000004.12 (7965310..8158832, complement)
See ABLIM2 in Epigenomics, MapViewer

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene AFAP1 antisense RNA 1 Neighboring gene actin filament associated protein 1 Neighboring gene uncharacterized LOC389199 Neighboring gene microRNA 95 Neighboring gene guanine monphosphate synthetase pseudogene 1 Neighboring gene SH3 domain and tetratricopeptide repeats 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Axon guidance, organism-specific biosystem (from KEGG)
    Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
  • Axon guidance, conserved biosystem (from KEGG)
    Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
  • Axon guidance, organism-specific biosystem (from REACTOME)
    Axon guidance, organism-specific biosystemAxon guidance / axon pathfinding is the process by which neurons send out axons to reach the correct targets. Growing axons have a highly motile structure at the growing tip called the growth cone, w...
  • DCC mediated attractive signaling, organism-specific biosystem (from REACTOME)
    DCC mediated attractive signaling, organism-specific biosystemThe DCC family includes DCC and neogenin in vertebrates. DCC is required for netrin-induced axon attraction. DCC is a transmembrane protein lacking any identifiable catalytic activity. Protein tyrosi...
  • Developmental Biology, organism-specific biosystem (from REACTOME)
    Developmental Biology, organism-specific biosystemAs a first step towards capturing the array of processes by which a fertilized egg gives rise to the diverse tissues of the body, examples of three kinds of processes have been annotated. These are a...
  • Netrin-1 signaling, organism-specific biosystem (from REACTOME)
    Netrin-1 signaling, organism-specific biosystemNetrins are secreted proteins that play a crucial role in neuronal migration and in axon guidance during the development of the nervous system. To date, several Netrins have been described in mouse a...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
actin binding IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
axon guidance TAS
Traceable Author Statement
more info
 
positive regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
actin cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
myofibril IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
actin-binding LIM protein 2
Names
actin-binding LIM protein 2
abLIM-2
actin binding LIM protein 2
actin-binding LIM protein family member 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130083.1NP_001123555.1  actin-binding LIM protein 2 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AJ748601, AK094798, AK097003, BC067214, BE155865, BQ267829
    Consensus CDS
    CCDS47014.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Conserved Domains (5) summary
    smart00153
    Location:610645
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 265
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 269
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  2. NM_001130084.1NP_001123556.1  actin-binding LIM protein 2 isoform 2

    See proteins identical to NP_001123556.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the mid-coding region, compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
    Source sequence(s)
    AJ748601, AK097003, BC067214, BQ267829
    Consensus CDS
    CCDS47013.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Conserved Domains (5) summary
    smart00153
    Location:576611
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 264
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 268
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  3. NM_001130085.1NP_001123557.1  actin-binding LIM protein 2 isoform 3

    See proteins identical to NP_001123557.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the mid-coding region, and lacks a segment in the 3' coding region, compared to variant 1. The resulting isoform (3) is shorter than isoform 1.
    Source sequence(s)
    AJ748600, AK097003, BC067214, BQ267829
    Consensus CDS
    CCDS47012.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000441255, ENST00000545242
    Conserved Domains (5) summary
    smart00153
    Location:537572
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 262
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 301
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 267
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 322
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  4. NM_001130086.1NP_001123558.1  actin-binding LIM protein 2 isoform 4

    See proteins identical to NP_001123558.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks an alternate in-frame segment and uses an alternate in-frame splice site in the mid-coding region, compared to variant 1. The resulting isoform (4) is shorter than isoform 1.
    Source sequence(s)
    AJ748601, AK097003, BC067214, BQ267829, DQ413177
    Consensus CDS
    CCDS47011.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Conserved Domains (5) summary
    smart00153
    Location:524559
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 260
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 300
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 264
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 320
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  5. NM_001130087.1NP_001123559.1  actin-binding LIM protein 2 isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) includes an alternate in-frame exon and uses an alternate in-frame splice site in the mid-coding region, and lacks alternate in-frame segments in both the mid- and 3' coding regions, compared to variant 1. The resulting isoform (5) is shorter than isoform 1.
    Source sequence(s)
    AK094754, AK094798, AK097003, BC067214, BQ267829
    Consensus CDS
    CCDS47015.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000354887, OTTHUMP00000219315, ENST00000361737, OTTHUMT00000363009
    Conserved Domains (5) summary
    smart00153
    Location:496531
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 259
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 298
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 264
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 320
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  6. NM_001130088.1NP_001123560.1  actin-binding LIM protein 2 isoform 7

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) differs in the 3' UTR, includes an alternate in-frame exon and lacks an alternate in-frame segment in the mid-coding region, and lacks several exons in the 3' coding region, compared to variant 1. The resulting isoform (7) has a distinct C-terminus and is shorter than isoform 1.
    Source sequence(s)
    AK094798, BC067214, BM718728, BQ005420
    Consensus CDS
    CCDS47016.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000389410, OTTHUMP00000217348, ENST00000428004, OTTHUMT00000358861
    Conserved Domains (4) summary
    cd09327
    Location:2475
    Blast Score: 254
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 291
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 259
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 312
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  7. NM_001286688.1NP_001273617.1  actin-binding LIM protein 2 isoform 8

    See proteins identical to NP_001273617.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR and coding sequence, contains an alternate in-frame exon, and lacks an alternate in-frame segment compared to variant 1. The resulting isoform (8) is shorter at the N-terminus, lacks an alternate segment, and contains another alternate segment compared to isoform 1.
    Source sequence(s)
    AK094798, AK097003, BQ267829, DA392726
    Consensus CDS
    CCDS68669.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Conserved Domains (2) summary
    smart00153
    Location:311346
    Blast Score: 176
    VHP; Villin headpiece domain
    cl02475
    Location:124
    Blast Score: 154
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
  8. NM_032432.4NP_115808.3  actin-binding LIM protein 2 isoform 6

    See proteins identical to NP_115808.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) lacks alternate in-frame segments in both the mid- and 3' coding regions, compared to variant 1. The resulting isoform (6) is shorter than isoform 1.
    Source sequence(s)
    AK094798, AK097003, BC067214, BC122567, BQ267829
    Consensus CDS
    CCDS54719.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Conserved Domains (5) summary
    smart00153
    Location:486521
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 257
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 297
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 263
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 318
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000004.12

    Range
    7965310..8158832, complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005248015.1XP_005248072.1  

    Conserved Domains (5) summary
    smart00153
    Location:661696
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2475
    Blast Score: 269
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    Blast Score: 306
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    Blast Score: 272
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    Blast Score: 326
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  2. XM_005248016.2XP_005248073.1  

    Conserved Domains (5) summary
    smart00153
    Location:633668
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 268
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 305
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 271
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 326
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  3. XM_006713927.1XP_006713990.1  

    Conserved Domains (5) summary
    smart00153
    Location:501536
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 260
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 298
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 265
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 320
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  4. XM_006713926.1XP_006713989.1  

    Conserved Domains (5) summary
    smart00153
    Location:540575
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 262
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 301
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 266
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 322
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  5. XM_005248028.2XP_005248085.1  

    Conserved Domains (5) summary
    smart00153
    Location:502537
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 260
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 298
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 265
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 320
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  6. XM_005248025.2XP_005248082.1  

    Conserved Domains (5) summary
    smart00153
    Location:541576
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 262
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 301
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 266
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 322
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  7. XM_006713923.1XP_006713986.1  

    Conserved Domains (5) summary
    smart00153
    Location:626661
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 267
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 271
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 325
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  8. XM_006713921.1XP_006713984.1  

    Conserved Domains (5) summary
    smart00153
    Location:665700
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 269
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 305
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 272
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 326
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  9. XM_005248017.2XP_005248074.1  

    Conserved Domains (5) summary
    smart00153
    Location:627662
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 267
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 271
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 325
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  10. XM_005248014.2XP_005248071.1  

    Conserved Domains (5) summary
    smart00153
    Location:666701
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 269
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 305
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 272
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 326
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  11. XM_005248030.2XP_005248087.1  

    Conserved Domains (5) summary
    smart00153
    Location:490525
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 258
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 297
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 263
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 319
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  12. XM_005248027.2XP_005248084.1  

    Conserved Domains (5) summary
    smart00153
    Location:529564
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 260
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 299
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 265
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 320
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  13. XM_005248029.2XP_005248086.1  

    Conserved Domains (5) summary
    smart00153
    Location:491526
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 258
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 297
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 263
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 319
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  14. XM_005248026.2XP_005248083.1  

    Conserved Domains (5) summary
    smart00153
    Location:530565
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 260
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 300
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 264
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 320
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  15. XM_005248024.2XP_005248081.1  

    Conserved Domains (5) summary
    smart00153
    Location:542577
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 262
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 301
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 268
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 322
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  16. XM_005248022.2XP_005248079.1  

    Conserved Domains (5) summary
    smart00153
    Location:581616
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 265
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 269
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  17. XM_006713922.1XP_006713985.1  

    Conserved Domains (5) summary
    smart00153
    Location:655690
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 267
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 305
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 271
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 325
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  18. XM_006713925.1XP_006713988.1  

    Conserved Domains (5) summary
    smart00153
    Location:586621
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 265
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 302
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 270
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  19. XM_006713924.1XP_006713987.1  

    Conserved Domains (5) summary
    smart00153
    Location:625660
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 267
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 304
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 271
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 324
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  20. XM_005248021.2XP_005248078.1  

    Conserved Domains (5) summary
    smart00153
    Location:587622
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 265
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 302
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 270
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  21. XM_005248018.2XP_005248075.1  

    Conserved Domains (5) summary
    smart00153
    Location:626661
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 267
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 304
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 271
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 324
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  22. XM_005248023.2XP_005248080.1  

    Conserved Domains (5) summary
    smart00153
    Location:575610
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 263
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 301
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 269
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 322
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  23. XM_005248020.2XP_005248077.1  

    Conserved Domains (5) summary
    smart00153
    Location:614649
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 266
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 270
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  24. XM_005248019.2XP_005248076.1  

    Conserved Domains (5) summary
    smart00153
    Location:615650
    Blast Score: 176
    VHP; Villin headpiece domain
    cd09327
    Location:2980
    Blast Score: 266
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 303
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 270
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 323
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
  25. XM_005248031.2XP_005248088.1  

    Conserved Domains (4) summary
    cd09327
    Location:2980
    Blast Score: 255
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    Blast Score: 291
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    Blast Score: 259
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    Blast Score: 313
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins

Alternate HuRef

Genomic

  1. AC_000136.1 Alternate HuRef

    Range
    7888374..8079979, complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018915.2 Alternate CHM1_1.1

    Range
    7965064..8158514, complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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