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Ctnnb1 catenin beta 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 84353, updated on 17-May-2016
Official Symbol
Ctnnb1provided by RGD
Official Full Name
catenin beta 1provided by RGD
Primary source
RGD:70487
See related
Ensembl:ENSRNOG00000054172
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Also known as
Catnb
Summary
involved in mediating the interaction between cadherins and the actin cytoskeleton [RGD, Feb 2006]
Orthologs
Location:
8q32
Exon count:
15
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (129617770..129628378)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 8 NC_005107.3 (128798888..128825828)

Chromosome 8 - NC_005107.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693182 Neighboring gene uncharacterized LOC103693183 Neighboring gene unc-51 like kinase 4 Neighboring gene trafficking protein, kinesin binding 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
DNA binding ISO
Inferred from Sequence Orthology
more info
 
I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 
I-SMAD binding ISO
Inferred from Sequence Orthology
more info
 
R-SMAD binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II activating transcription factor binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II activating transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
RNA polymerase II transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
SMAD binding ISO
Inferred from Sequence Orthology
more info
 
alpha-catenin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
alpha-catenin binding IEA
Inferred from Electronic Annotation
more info
 
alpha-catenin binding ISO
Inferred from Sequence Orthology
more info
 
cadherin binding IDA
Inferred from Direct Assay
more info
PubMed 
cadherin binding IEA
Inferred from Electronic Annotation
more info
 
cadherin binding IPI
Inferred from Physical Interaction
more info
PubMed 
cadherin binding ISO
Inferred from Sequence Orthology
more info
 
chromatin binding ISO
Inferred from Sequence Orthology
more info
 
double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 
double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
 
enzyme binding ISO
Inferred from Sequence Orthology
more info
 
estrogen receptor binding IEA
Inferred from Electronic Annotation
more info
 
estrogen receptor binding ISO
Inferred from Sequence Orthology
more info
 
euchromatin binding IEA
Inferred from Electronic Annotation
more info
 
euchromatin binding ISO
Inferred from Sequence Orthology
more info
 
ion channel binding IEA
Inferred from Electronic Annotation
more info
 
ion channel binding ISO
Inferred from Sequence Orthology
more info
 
ionotropic glutamate receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
kinase binding ISO
Inferred from Sequence Orthology
more info
 
nitric-oxide synthase binding IPI
Inferred from Physical Interaction
more info
PubMed 
nuclear hormone receptor binding ISO
Inferred from Sequence Orthology
more info
 
protein C-terminus binding IEA
Inferred from Electronic Annotation
more info
 
protein C-terminus binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein complex binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
protein kinase binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
protein phosphatase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 
protein phosphatase binding ISO
Inferred from Sequence Orthology
more info
 
repressing transcription factor binding IEA
Inferred from Electronic Annotation
more info
 
repressing transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
signal transducer activity IEA
Inferred from Electronic Annotation
more info
 
transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 
transcription coactivator activity ISO
Inferred from Sequence Orthology
more info
 
transcription coactivator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
transcription factor activity, sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
transcription factor activity, sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
transcription regulatory region DNA binding IEA
Inferred from Electronic Annotation
more info
 
transcription regulatory region DNA binding ISO
Inferred from Sequence Orthology
more info
 
transcription regulatory region DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
Schwann cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
T cell differentiation ISO
Inferred from Sequence Orthology
more info
 
T cell differentiation in thymus IEA
Inferred from Electronic Annotation
more info
 
T cell differentiation in thymus ISO
Inferred from Sequence Orthology
more info
 
Wnt signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Wnt signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
adherens junction assembly IEA
Inferred from Electronic Annotation
more info
 
adherens junction assembly ISO
Inferred from Sequence Orthology
more info
 
adherens junction assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
adherens junction organization ISO
Inferred from Sequence Orthology
more info
 
animal organ development ISO
Inferred from Sequence Orthology
more info
 
anterior/posterior axis specification IEA
Inferred from Electronic Annotation
more info
 
anterior/posterior axis specification ISO
Inferred from Sequence Orthology
more info
 
bone resorption IEA
Inferred from Electronic Annotation
more info
 
bone resorption ISO
Inferred from Sequence Orthology
more info
 
branching involved in ureteric bud morphogenesis IEA
Inferred from Electronic Annotation
more info
 
branching involved in ureteric bud morphogenesis ISO
Inferred from Sequence Orthology
more info
 
canonical Wnt signaling pathway ISO
Inferred from Sequence Orthology
more info
 
canonical Wnt signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
canonical Wnt signaling pathway involved in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
canonical Wnt signaling pathway involved in negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation IEA
Inferred from Electronic Annotation
more info
 
canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation ISO
Inferred from Sequence Orthology
more info
 
canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition IEA
Inferred from Electronic Annotation
more info
 
canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition ISO
Inferred from Sequence Orthology
more info
 
canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition ISS
Inferred from Sequence or Structural Similarity
more info
 
cell adhesion ISO
Inferred from Sequence Orthology
more info
 
cell adhesion ISS
Inferred from Sequence or Structural Similarity
more info
 
cell differentiation ISO
Inferred from Sequence Orthology
more info
 
cell fate determination ISO
Inferred from Sequence Orthology
more info
 
cell fate specification IEA
Inferred from Electronic Annotation
more info
 
cell fate specification ISO
Inferred from Sequence Orthology
more info
 
cell maturation IEA
Inferred from Electronic Annotation
more info
 
cell maturation ISO
Inferred from Sequence Orthology
more info
 
cell morphogenesis involved in differentiation IEA
Inferred from Electronic Annotation
more info
 
cell morphogenesis involved in differentiation ISO
Inferred from Sequence Orthology
more info
 
cell proliferation ISO
Inferred from Sequence Orthology
more info
 
cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 
cell-matrix adhesion ISO
Inferred from Sequence Orthology
more info
 
cellular process ISO
Inferred from Sequence Orthology
more info
 
cellular protein localization ISO
Inferred from Sequence Orthology
more info
 
cellular response to fibroblast growth factor stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 
cellular response to growth factor stimulus ISO
Inferred from Sequence Orthology
more info
 
cellular response to growth factor stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
cellular response to indole-3-methanol IEA
Inferred from Electronic Annotation
more info
 
cellular response to indole-3-methanol ISO
Inferred from Sequence Orthology
more info
 
cellular response to indole-3-methanol ISS
Inferred from Sequence or Structural Similarity
more info
 
cellular response to insulin-like growth factor stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
cellular response to insulin-like growth factor stimulus IMP
Inferred from Mutant Phenotype
more info
PubMed 
cellular response to lithium ion IEP
Inferred from Expression Pattern
more info
PubMed 
cellular response to mechanical stimulus IDA
Inferred from Direct Assay
more info
PubMed 
central nervous system vasculogenesis IEA
Inferred from Electronic Annotation
more info
 
central nervous system vasculogenesis ISO
Inferred from Sequence Orthology
more info
 
chromatin-mediated maintenance of transcription IEA
Inferred from Electronic Annotation
more info
 
chromatin-mediated maintenance of transcription ISO
Inferred from Sequence Orthology
more info
 
cranial ganglion development IEA
Inferred from Electronic Annotation
more info
 
cranial ganglion development ISO
Inferred from Sequence Orthology
more info
 
cranial skeletal system development ISO
Inferred from Sequence Orthology
more info
 
dopaminergic neuron differentiation IEA
Inferred from Electronic Annotation
more info
 
dorsal root ganglion development IEA
Inferred from Electronic Annotation
more info
 
dorsal root ganglion development ISO
Inferred from Sequence Orthology
more info
 
dorsal/ventral axis specification IEA
Inferred from Electronic Annotation
more info
 
dorsal/ventral axis specification ISO
Inferred from Sequence Orthology
more info
 
dorsal/ventral pattern formation ISO
Inferred from Sequence Orthology
more info
 
ectoderm development IEA
Inferred from Electronic Annotation
more info
 
ectoderm development ISO
Inferred from Sequence Orthology
more info
 
embryonic axis specification IEA
Inferred from Electronic Annotation
more info
 
embryonic axis specification ISO
Inferred from Sequence Orthology
more info
 
embryonic brain development IEA
Inferred from Electronic Annotation
more info
 
embryonic brain development ISO
Inferred from Sequence Orthology
more info
 
embryonic cranial skeleton morphogenesis IEA
Inferred from Electronic Annotation
more info
 
embryonic digit morphogenesis IEA
Inferred from Electronic Annotation
more info
 
embryonic digit morphogenesis ISO
Inferred from Sequence Orthology
more info
 
embryonic foregut morphogenesis IEA
Inferred from Electronic Annotation
more info
 
embryonic foregut morphogenesis ISO
Inferred from Sequence Orthology
more info
 
embryonic forelimb morphogenesis IEA
Inferred from Electronic Annotation
more info
 
embryonic forelimb morphogenesis ISO
Inferred from Sequence Orthology
more info
 
embryonic heart tube development IEA
Inferred from Electronic Annotation
more info
 
embryonic heart tube development ISO
Inferred from Sequence Orthology
more info
 
embryonic hindlimb morphogenesis IEA
Inferred from Electronic Annotation
more info
 
embryonic hindlimb morphogenesis ISO
Inferred from Sequence Orthology
more info
 
embryonic skeletal limb joint morphogenesis IEA
Inferred from Electronic Annotation
more info
 
embryonic skeletal limb joint morphogenesis ISO
Inferred from Sequence Orthology
more info
 
endoderm formation ISO
Inferred from Sequence Orthology
more info
 
endodermal cell fate commitment IEA
Inferred from Electronic Annotation
more info
 
endodermal cell fate commitment ISO
Inferred from Sequence Orthology
more info
 
endothelial tube morphogenesis IEA
Inferred from Electronic Annotation
more info
 
endothelial tube morphogenesis ISO
Inferred from Sequence Orthology
more info
 
endothelial tube morphogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
epithelial cell differentiation involved in prostate gland development IEA
Inferred from Electronic Annotation
more info
 
epithelial cell differentiation involved in prostate gland development ISO
Inferred from Sequence Orthology
more info
 
epithelial tube branching involved in lung morphogenesis IEA
Inferred from Electronic Annotation
more info
 
epithelial tube branching involved in lung morphogenesis ISO
Inferred from Sequence Orthology
more info
 
forebrain development ISO
Inferred from Sequence Orthology
more info
 
fungiform papilla formation IEA
Inferred from Electronic Annotation
more info
 
fungiform papilla formation ISO
Inferred from Sequence Orthology
more info
 
gastrulation with mouth forming second IEA
Inferred from Electronic Annotation
more info
 
gastrulation with mouth forming second ISO
Inferred from Sequence Orthology
more info
 
genitalia morphogenesis IEA
Inferred from Electronic Annotation
more info
 
genitalia morphogenesis ISO
Inferred from Sequence Orthology
more info
 
glial cell fate determination IEA
Inferred from Electronic Annotation
more info
 
glial cell fate determination ISO
Inferred from Sequence Orthology
more info
 
hair cycle process ISO
Inferred from Sequence Orthology
more info
 
hair follicle morphogenesis IEA
Inferred from Electronic Annotation
more info
 
hair follicle morphogenesis ISO
Inferred from Sequence Orthology
more info
 
hair follicle placode formation IEA
Inferred from Electronic Annotation
more info
 
hair follicle placode formation ISO
Inferred from Sequence Orthology
more info
 
heart development ISO
Inferred from Sequence Orthology
more info
 
hemopoiesis ISO
Inferred from Sequence Orthology
more info
 
hindbrain development IEA
Inferred from Electronic Annotation
more info
 
hindbrain development ISO
Inferred from Sequence Orthology
more info
 
in utero embryonic development IEA
Inferred from Electronic Annotation
more info
 
in utero embryonic development ISO
Inferred from Sequence Orthology
more info
 
kidney development ISO
Inferred from Sequence Orthology
more info
 
layer formation in cerebral cortex IEA
Inferred from Electronic Annotation
more info
 
layer formation in cerebral cortex ISO
Inferred from Sequence Orthology
more info
 
lens morphogenesis in camera-type eye IEA
Inferred from Electronic Annotation
more info
 
lens morphogenesis in camera-type eye ISO
Inferred from Sequence Orthology
more info
 
limb development ISO
Inferred from Sequence Orthology
more info
 
liver development IEP
Inferred from Expression Pattern
more info
PubMed 
lung cell differentiation IEA
Inferred from Electronic Annotation
more info
 
lung cell differentiation ISO
Inferred from Sequence Orthology
more info
 
lung development ISO
Inferred from Sequence Orthology
more info
 
lung induction IEA
Inferred from Electronic Annotation
more info
 
lung induction ISO
Inferred from Sequence Orthology
more info
 
lung-associated mesenchyme development IEA
Inferred from Electronic Annotation
more info
 
lung-associated mesenchyme development ISO
Inferred from Sequence Orthology
more info
 
male genitalia development IEA
Inferred from Electronic Annotation
more info
 
male genitalia development ISO
Inferred from Sequence Orthology
more info
 
mesenchymal cell proliferation involved in lung development IEA
Inferred from Electronic Annotation
more info
 
mesenchymal cell proliferation involved in lung development ISO
Inferred from Sequence Orthology
more info
 
metanephros morphogenesis IEA
Inferred from Electronic Annotation
more info
 
metanephros morphogenesis ISO
Inferred from Sequence Orthology
more info
 
midbrain development IEA
Inferred from Electronic Annotation
more info
 
midbrain development ISO
Inferred from Sequence Orthology
more info
 
midbrain dopaminergic neuron differentiation ISO
Inferred from Sequence Orthology
more info
 
midgut development IEP
Inferred from Expression Pattern
more info
PubMed 
morphogenesis of embryonic epithelium ISO
Inferred from Sequence Orthology
more info
 
myoblast differentiation IEP
Inferred from Expression Pattern
more info
PubMed 
negative regulation of apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 
negative regulation of apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
 
negative regulation of cell differentiation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of cell proliferation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of cell proliferation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of cell proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of chondrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of chondrocyte differentiation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis IEA
Inferred from Electronic Annotation
more info
 
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis ISO
Inferred from Sequence Orthology
more info
 
negative regulation of mitotic cell cycle, embryonic IEA
Inferred from Electronic Annotation
more info
 
negative regulation of mitotic cell cycle, embryonic ISO
Inferred from Sequence Orthology
more info
 
negative regulation of mitotic cell cycle, embryonic ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of neuron death IEA
Inferred from Electronic Annotation
more info
 
negative regulation of neuron death ISO
Inferred from Sequence Orthology
more info
 
negative regulation of oligodendrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of oligodendrocyte differentiation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of osteoclast differentiation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of protein sumoylation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of protein sumoylation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of protein sumoylation ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
negative regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
negative regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
negative regulation of transcription, DNA-templated ISS
Inferred from Sequence or Structural Similarity
more info
 
nephron tubule formation IEA
Inferred from Electronic Annotation
more info
 
nephron tubule formation ISO
Inferred from Sequence Orthology
more info
 
neural plate development IEA
Inferred from Electronic Annotation
more info
 
neural plate development ISO
Inferred from Sequence Orthology
more info
 
neuron differentiation ISO
Inferred from Sequence Orthology
more info
 
neuron migration IEA
Inferred from Electronic Annotation
more info
 
neuron migration ISO
Inferred from Sequence Orthology
more info
 
odontogenesis of dentin-containing tooth IEA
Inferred from Electronic Annotation
more info
 
odontogenesis of dentin-containing tooth IEP
Inferred from Expression Pattern
more info
PubMed 
odontogenesis of dentin-containing tooth ISO
Inferred from Sequence Orthology
more info
 
oocyte development IEA
Inferred from Electronic Annotation
more info
 
oocyte development ISO
Inferred from Sequence Orthology
more info
 
osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 
osteoclast differentiation ISO
Inferred from Sequence Orthology
more info
 
oviduct development IEA
Inferred from Electronic Annotation
more info
 
oviduct development ISO
Inferred from Sequence Orthology
more info
 
pancreas development IEA
Inferred from Electronic Annotation
more info
 
pancreas development ISO
Inferred from Sequence Orthology
more info
 
patterning of blood vessels IEA
Inferred from Electronic Annotation
more info
 
patterning of blood vessels ISO
Inferred from Sequence Orthology
more info
 
positive regulation of DNA-templated transcription, initiation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of DNA-templated transcription, initiation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of I-kappaB kinase/NF-kappaB signaling IEA
Inferred from Electronic Annotation
more info
 
positive regulation of I-kappaB kinase/NF-kappaB signaling ISO
Inferred from Sequence Orthology
more info
 
positive regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 
positive regulation of MAPK cascade ISO
Inferred from Sequence Orthology
more info
 
positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of branching involved in lung morphogenesis ISO
Inferred from Sequence Orthology
more info
 
positive regulation of cell proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of chromatin-mediated maintenance of transcription IEA
Inferred from Electronic Annotation
more info
 
positive regulation of chromatin-mediated maintenance of transcription ISO
Inferred from Sequence Orthology
more info
 
positive regulation of determination of dorsal identity IEA
Inferred from Electronic Annotation
more info
 
positive regulation of determination of dorsal identity ISO
Inferred from Sequence Orthology
more info
 
positive regulation of endothelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of endothelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of epithelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of epithelial cell proliferation involved in prostate gland development IEA
Inferred from Electronic Annotation
more info
 
positive regulation of epithelial cell proliferation involved in prostate gland development ISO
Inferred from Sequence Orthology
more info
 
positive regulation of epithelial to mesenchymal transition ISO
Inferred from Sequence Orthology
more info
 
positive regulation of fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
positive regulation of fibroblast growth factor receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
positive regulation of heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
positive regulation of heparan sulfate proteoglycan biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of heparan sulfate proteoglycan biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of mesenchymal cell proliferation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of mesenchymal cell proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of neuroblast proliferation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of neuroblast proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of neuroblast proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 
positive regulation of neuron apoptotic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of osteoblast differentiation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of osteoblast differentiation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of sequence-specific DNA binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
positive regulation of sequence-specific DNA binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
positive regulation of skeletal muscle tissue development IEA
Inferred from Electronic Annotation
more info
 
positive regulation of skeletal muscle tissue development ISO
Inferred from Sequence Orthology
more info
 
positive regulation of telomerase activity IEA
Inferred from Electronic Annotation
more info
 
positive regulation of telomerase activity ISO
Inferred from Sequence Orthology
more info
 
positive regulation of telomere maintenance via telomerase IEA
Inferred from Electronic Annotation
more info
 
positive regulation of telomere maintenance via telomerase ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
positive regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription from RNA polymerase II promoter ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription, DNA-templated ISS
Inferred from Sequence or Structural Similarity
more info
 
protein heterooligomerization IPI
Inferred from Physical Interaction
more info
PubMed 
protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 
protein localization to cell surface ISO
Inferred from Sequence Orthology
more info
 
protein localization to cell surface ISS
Inferred from Sequence or Structural Similarity
more info
 
proximal/distal pattern formation IEA
Inferred from Electronic Annotation
more info
 
proximal/distal pattern formation ISO
Inferred from Sequence Orthology
more info
 
regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 
regulation of T cell proliferation ISO
Inferred from Sequence Orthology
more info
 
regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
regulation of calcium ion import IEA
Inferred from Electronic Annotation
more info
 
regulation of calcium ion import ISO
Inferred from Sequence Orthology
more info
 
regulation of calcium ion import ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of cell differentiation ISO
Inferred from Sequence Orthology
more info
 
regulation of cell proliferation ISO
Inferred from Sequence Orthology
more info
 
regulation of centriole-centriole cohesion IEA
Inferred from Electronic Annotation
more info
 
regulation of centriole-centriole cohesion ISO
Inferred from Sequence Orthology
more info
 
regulation of centriole-centriole cohesion ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of centromeric sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 
regulation of centromeric sister chromatid cohesion ISO
Inferred from Sequence Orthology
more info
 
regulation of centromeric sister chromatid cohesion ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of core promoter binding IEA
Inferred from Electronic Annotation
more info
 
regulation of core promoter binding ISO
Inferred from Sequence Orthology
more info
 
regulation of epithelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
regulation of euchromatin binding IEA
Inferred from Electronic Annotation
more info
 
regulation of euchromatin binding ISO
Inferred from Sequence Orthology
more info
 
regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
regulation of myelination IEA
Inferred from Electronic Annotation
more info
 
regulation of myelination ISO
Inferred from Sequence Orthology
more info
 
regulation of nephron tubule epithelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 
regulation of nephron tubule epithelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
regulation of osteoblast differentiation ISO
Inferred from Sequence Orthology
more info
 
regulation of osteoclast differentiation ISO
Inferred from Sequence Orthology
more info
 
regulation of protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 
regulation of protein localization to cell surface ISO
Inferred from Sequence Orthology
more info
 
regulation of protein localization to cell surface ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of secondary heart field cardioblast proliferation IEA
Inferred from Electronic Annotation
more info
 
regulation of secondary heart field cardioblast proliferation ISO
Inferred from Sequence Orthology
more info
 
regulation of smooth muscle cell proliferation IEA
Inferred from Electronic Annotation
more info
 
regulation of smooth muscle cell proliferation ISO
Inferred from Sequence Orthology
more info
 
regulation of smooth muscle cell proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
renal inner medulla development IEA
Inferred from Electronic Annotation
more info
 
renal inner medulla development ISO
Inferred from Sequence Orthology
more info
 
renal outer medulla development IEA
Inferred from Electronic Annotation
more info
 
renal outer medulla development ISO
Inferred from Sequence Orthology
more info
 
renal system development ISO
Inferred from Sequence Orthology
more info
 
renal vesicle formation IEA
Inferred from Electronic Annotation
more info
 
renal vesicle formation ISO
Inferred from Sequence Orthology
more info
 
response to activity IEP
Inferred from Expression Pattern
more info
PubMed 
response to cadmium ion IEP
Inferred from Expression Pattern
more info
PubMed 
response to cytokine IDA
Inferred from Direct Assay
more info
PubMed 
response to drug IEA
Inferred from Electronic Annotation
more info
 
response to drug ISO
Inferred from Sequence Orthology
more info
 
response to estradiol IEA
Inferred from Electronic Annotation
more info
 
response to estradiol IEP
Inferred from Expression Pattern
more info
PubMed 
response to estradiol ISO
Inferred from Sequence Orthology
more info
 
response to estradiol ISS
Inferred from Sequence or Structural Similarity
more info
 
response to estrogen IDA
Inferred from Direct Assay
more info
PubMed 
response to hormone IEP
Inferred from Expression Pattern
more info
PubMed 
response to organic cyclic compound IEP
Inferred from Expression Pattern
more info
PubMed 
single organismal cell-cell adhesion IDA
Inferred from Direct Assay
more info
PubMed 
single organismal cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
single organismal cell-cell adhesion ISS
Inferred from Sequence or Structural Similarity
more info
 
single organismal cell-cell adhesion TAS
Traceable Author Statement
more info
PubMed 
skeletal system development ISO
Inferred from Sequence Orthology
more info
 
skin development ISO
Inferred from Sequence Orthology
more info
 
smooth muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 
smooth muscle cell differentiation ISO
Inferred from Sequence Orthology
more info
 
sympathetic ganglion development IEA
Inferred from Electronic Annotation
more info
 
sympathetic ganglion development ISO
Inferred from Sequence Orthology
more info
 
sympathetic ganglion development ISS
Inferred from Sequence or Structural Similarity
more info
 
synapse organization IEA
Inferred from Electronic Annotation
more info
 
synapse organization ISO
Inferred from Sequence Orthology
more info
 
synaptic transmission IEA
Inferred from Electronic Annotation
more info
 
synaptic transmission ISO
Inferred from Sequence Orthology
more info
 
synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 
synaptic vesicle transport ISO
Inferred from Sequence Orthology
more info
 
thymus development IEA
Inferred from Electronic Annotation
more info
 
thymus development ISO
Inferred from Sequence Orthology
more info
 
trachea formation IEA
Inferred from Electronic Annotation
more info
 
trachea formation ISO
Inferred from Sequence Orthology
more info
 
trachea morphogenesis ISO
Inferred from Sequence Orthology
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
vasculature development ISO
Inferred from Sequence Orthology
more info
 
vasculogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
Scrib-APC-beta-catenin complex IEA
Inferred from Electronic Annotation
more info
 
Scrib-APC-beta-catenin complex ISO
Inferred from Sequence Orthology
more info
 
Wnt signalosome IEA
Inferred from Electronic Annotation
more info
 
Wnt signalosome ISO
Inferred from Sequence Orthology
more info
 
Z disc IEA
Inferred from Electronic Annotation
more info
 
Z disc ISO
Inferred from Sequence Orthology
more info
 
adherens junction ISO
Inferred from Sequence Orthology
more info
 
apical junction complex ISO
Inferred from Sequence Orthology
more info
 
apical part of cell IEA
Inferred from Electronic Annotation
more info
 
apical part of cell ISO
Inferred from Sequence Orthology
more info
 
basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
beta-catenin destruction complex IEA
Inferred from Electronic Annotation
more info
 
beta-catenin destruction complex ISO
Inferred from Sequence Orthology
more info
 
beta-catenin destruction complex ISS
Inferred from Sequence or Structural Similarity
more info
 
beta-catenin-TCF complex ISO
Inferred from Sequence Orthology
more info
 
beta-catenin-TCF7L2 complex IEA
Inferred from Electronic Annotation
more info
 
beta-catenin-TCF7L2 complex ISO
Inferred from Sequence Orthology
more info
 
beta-catenin-TCF7L2 complex ISS
Inferred from Sequence or Structural Similarity
more info
 
bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 
bicellular tight junction ISO
Inferred from Sequence Orthology
more info
 
catenin complex IBA
Inferred from Biological aspect of Ancestor
more info
 
catenin complex IEA
Inferred from Electronic Annotation
more info
 
catenin complex ISO
Inferred from Sequence Orthology
more info
 
catenin complex ISS
Inferred from Sequence or Structural Similarity
more info
 
catenin-TCF7L2 complex ISO
Inferred from Sequence Orthology
more info
 
cell cortex IEA
Inferred from Electronic Annotation
more info
 
cell cortex ISO
Inferred from Sequence Orthology
more info
 
cell cortex ISS
Inferred from Sequence or Structural Similarity
more info
 
cell junction ISO
Inferred from Sequence Orthology
more info
 
cell junction ISS
Inferred from Sequence or Structural Similarity
more info
 
cell periphery ISO
Inferred from Sequence Orthology
more info
 
cell periphery ISS
Inferred from Sequence or Structural Similarity
more info
 
cell projection membrane ISO
Inferred from Sequence Orthology
more info
 
cell-cell adherens junction IDA
Inferred from Direct Assay
more info
PubMed 
cell-cell adherens junction ISO
Inferred from Sequence Orthology
more info
 
cell-cell junction ISO
Inferred from Sequence Orthology
more info
 
cell-cell junction ISS
Inferred from Sequence or Structural Similarity
more info
 
centrosome IEA
Inferred from Electronic Annotation
more info
 
centrosome ISO
Inferred from Sequence Orthology
more info
 
centrosome ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm TAS
Traceable Author Statement
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IEA
Inferred from Electronic Annotation
more info
 
cytosol ISO
Inferred from Sequence Orthology
more info
 
dendritic shaft IDA
Inferred from Direct Assay
more info
PubMed 
extracellular exosome IEA
Inferred from Electronic Annotation
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
fascia adherens IEA
Inferred from Electronic Annotation
more info
 
fascia adherens ISO
Inferred from Sequence Orthology
more info
 
flotillin complex IEA
Inferred from Electronic Annotation
more info
 
flotillin complex ISO
Inferred from Sequence Orthology
more info
 
focal adhesion IEA
Inferred from Electronic Annotation
more info
 
focal adhesion ISO
Inferred from Sequence Orthology
more info
 
intercalated disc ISO
Inferred from Sequence Orthology
more info
 
lamellipodium IEA
Inferred from Electronic Annotation
more info
 
lamellipodium ISO
Inferred from Sequence Orthology
more info
 
lateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
lateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
membrane IDA
Inferred from Direct Assay
more info
PubMed 
membrane ISO
Inferred from Sequence Orthology
more info
 
microvillus membrane IEA
Inferred from Electronic Annotation
more info
 
microvillus membrane ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
nuclear euchromatin IEA
Inferred from Electronic Annotation
more info
 
nuclear euchromatin ISO
Inferred from Sequence Orthology
more info
 
nuclear transcription factor complex ISO
Inferred from Sequence Orthology
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 
perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
perinuclear region of cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
protein complex IDA
Inferred from Direct Assay
more info
PubMed 
protein complex ISO
Inferred from Sequence Orthology
more info
 
protein-DNA complex IEA
Inferred from Electronic Annotation
more info
 
protein-DNA complex ISO
Inferred from Sequence Orthology
more info
 
protein-DNA complex ISS
Inferred from Sequence or Structural Similarity
more info
 
spindle pole IEA
Inferred from Electronic Annotation
more info
 
synapse IDA
Inferred from Direct Assay
more info
PubMed 
transcription factor complex ISO
Inferred from Sequence Orthology
more info
 
transcription factor complex ISS
Inferred from Sequence or Structural Similarity
more info
 
Preferred Names
catenin beta-1
Names
beta-catenin
catenin (cadherin associated protein), beta 1
catenin (cadherin associated protein), beta 1, 88kDa
catenin beta

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053357.2NP_445809.2  catenin beta-1

    See identical proteins and their annotated locations for NP_445809.2

    Status: PROVISIONAL

    Source sequence(s)
    AF121265
    UniProtKB/Swiss-Prot
    Q9WU82
    Related
    ENSRNOP00000068620, ENSRNOT00000079085
    Conserved Domains (2) summary
    smart00185
    Location:350390
    ARM; Armadillo/beta-catenin-like repeats
    cd00020
    Location:399518
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005107.4 Reference Rnor_6.0 Primary Assembly

    Range
    129617770..129628378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008766691.1XP_008764913.1  

    See identical proteins and their annotated locations for XP_008764913.1

    UniProtKB/Swiss-Prot
    Q9WU82
    UniProtKB/TrEMBL
    A0A0G2JT93
    Conserved Domains (2) summary
    smart00185
    Location:350390
    ARM; Armadillo/beta-catenin-like repeats
    cd00020
    Location:399518
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

Alternate Rn_Celera

Genomic

  1. AC_000076.1 Alternate Rn_Celera

    Range
    119795816..119805325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)