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AT1G05030 Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839340, updated on 7-Sep-2023

Summary

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Gene symbol
AT1G05030
Gene description
Major facilitator superfamily protein
Primary source
Araport:AT1G05030
Locus tag
AT1G05030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T7A14.10; T7A14_10
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Sequence:
Chromosome: 1; NC_003070.9 (1438048..1441933, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ethylene-forming enzyme Neighboring gene ENTH/ANTH/VHS superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001331515.1
NM_100382.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_171996.2
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1438048..1441933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100382.3 → NP_171996.2  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171996.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WVE9, Q5XF02, Q9ZVN7
    UniProtKB/TrEMBL
    A0A5S9SN85, A0A654E7X7
    Conserved Domains (1) summary
    cd17315
    Location:85 → 504
    MFS_GLUT_like; Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily

  2. NM_001331515.1 → NP_001320630.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WCC3, A0A1P8ANF6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WVE9.2

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