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AT5G23540 Mov34/MPN/PAD-1 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832420, updated on 7-Sep-2023

Summary

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Gene symbol
AT5G23540
Gene description
Mov34/MPN/PAD-1 family protein
Primary source
Araport:AT5G23540
Locus tag
AT5G23540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQM1.19; MQM1_19
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (7937630..7939604)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene carboxyesterase 18 Neighboring gene KOW domain-containing protein Neighboring gene Got1/Sft2-like vescicle transport protein family Neighboring gene XS domain-containing protein / XS zinc finger domain-containing protein-like protein Neighboring gene Transmembrane CLPTM1 family protein Neighboring gene calmodulin-like domain protein kinase 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. Van Leene J, et al. Mol Cell Proteomics, 2007 Jul. PMID 17426018
  2. Subunit interaction maps for the regulatory particle of the 26S proteasome and the COP9 signalosome. Fu H, et al. EMBO J, 2001 Dec 17. PMID 11742986, Free PMC Article
  3. Structure and functional analysis of the 26S proteasome subunits from plants. Fu H, et al. Mol Biol Rep, 1999 Apr. PMID 10363660
  4. Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes. Book AJ, et al. J Biol Chem, 2010 Aug 13. PMID 20516081, Free PMC Article
  5. JAMM: a metalloprotease-like zinc site in the proteasome and signalosome. Ambroggio XI, et al. PLoS Biol, 2004 Jan. PMID 14737182, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001085148.2
NM_122261.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein catabolic process TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within ubiquitin-dependent protein catabolic process TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus TAS
Traceable Author Statement
more info
 PubMed 
part_of proteasome complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Mov34/MPN/PAD-1 family protein
NP_001078617.1
  • Mov34/MPN/PAD-1 family protein; INVOLVED IN: response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 1553 Blast hits to 1553 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 704; Fungi - 411; Plants - 244; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink).
NP_197745.1
  • Mov34/MPN/PAD-1 family protein; INVOLVED IN: response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7937630..7939604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122261.3 → NP_197745.1  Mov34/MPN/PAD-1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197745.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WQQ6, Q8LD11, Q9LT08
    UniProtKB/TrEMBL
    A0A178UJB9, A0A5S9Y6Y2
    Conserved Domains (1) summary
    cd08069
    Location:19 → 285
    MPN_RPN11_CSN5; Mov34/MPN/PAD-1 family: proteasomal regulatory protein Rpn11 and signalosome complex subunit CSN5

  2. NM_001085148.2 → NP_001078617.1  Mov34/MPN/PAD-1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078617.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MR12
    Conserved Domains (1) summary
    cd08069
    Location:1 → 236
    MPN_RPN11_CSN5; Mov34/MPN/PAD-1 family: proteasomal regulatory protein Rpn11 and signalosome complex subunit CSN5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LT08.1

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