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LOC8279089 putative glucose-6-phosphate 1-epimerase [ Ricinus communis (castor bean) ]

Gene ID: 8279089, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8279089
Gene description
putative glucose-6-phosphate 1-epimerase
Locus tag
RCOM_1064700
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 5 NC_063260.1 (13614668..13618135)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994381.1 (581619..585046)

Chromosome 5 - NC_063260.1Genomic Context describing neighboring genes Neighboring gene alkane hydroxylase MAH1 Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene chalcone isomerase-like protein 1 Neighboring gene ribosomal RNA-processing protein 8 Neighboring gene serine/threonine-protein kinase STY13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative glucose-6-phosphate 1-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063260.1 Reference ASM1957865v1

    Range
    13614668..13618135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002521433.4 → XP_002521479.1  putative glucose-6-phosphate 1-epimerase isoform X1

    See identical proteins and their annotated locations for XP_002521479.1

    UniProtKB/TrEMBL
    B9S660
    Conserved Domains (1) summary
    cd09020
    Location:14 → 285
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  2. XM_025157772.2 → XP_025013540.1  putative glucose-6-phosphate 1-epimerase isoform X2

    Conserved Domains (1) summary
    cd09020
    Location:3 → 236
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  3. XM_048375134.1 → XP_048231091.1  putative glucose-6-phosphate 1-epimerase isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases