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Phum_PHUM378180 ubiquitin carboxyl-terminal hydrolase, putative [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8237172, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM378180
Gene description
ubiquitin carboxyl-terminal hydrolase, putative
Locus tag
Phum_PHUM378180
See related
VectorBase:PHUM378180
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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Location:
chromosome: Unknown
Exon count:
8

NW_002987435.1Genomic Context describing neighboring genes Neighboring gene rab23, putative Neighboring gene uncharacterized protein Neighboring gene tyrosine-protein kinase Src42A, putative Neighboring gene Very low-density lipoprotein receptor precursor, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987435.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase, putative
XP_002428382.1
  • encoded by transcript Phum_PHUM378180-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987435.1 Reference assembly

    Range
    120910..123341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002428337.1 → XP_002428382.1  ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002428382.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VQI8
    Conserved Domains (4) summary
    smart00213
    Location:4 → 70
    UBQ; Ubiquitin homologues
    cd02657
    Location:103 → 473
    Peptidase_C19A; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl ...
    pfam00443
    Location:101 → 472
    UCH; Ubiquitin carboxyl-terminal hydrolase
    cl00155
    Location:5 → 72
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
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