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IDL1 inflorescence deficient in abscission (IDA)-like 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822153, updated on 7-Sep-2023

Summary

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Gene symbol
IDL1
Gene description
inflorescence deficient in abscission (IDA)-like 1
Primary source
Araport:AT3G25655
Locus tag
AT3G25655
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
inflorescence deficient in abscission (IDA)-like 1
Summary
Similar to Inflorescence Deficient in Abscission (IDA). Involved in floral organ abscission.
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (9337431..9338075, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SKP1-like 15 Neighboring gene ncRNA Neighboring gene Amidase family protein Neighboring gene Leucine-rich repeat (LRR) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The IDA/IDA-LIKE and PIP/PIP-LIKE gene families in Arabidopsis: phylogenetic relationship, expression patterns, and transcriptional effect of the PIPL3 peptide. Vie AK, et al. J Exp Bot, 2015 Aug. PMID 26062745, Free PMC Article
  2. The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2. Stenvik GE, et al. Plant Cell, 2008 Jul. PMID 18660431, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Members of the IDA/IDL and PIP/PIPL gene families are expressed during development or induced by stress.
    Title: The IDA/IDA-LIKE and PIP/PIP-LIKE gene families in Arabidopsis: phylogenetic relationship, expression patterns, and transcriptional effect of the PIPL3 peptide.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_113464.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within floral organ abscission IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
inflorescence deficient in abscission (IDA)-like 1
NP_566774.1
  • inflorescence deficient in abscission (IDA)-like 1 (IDL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: floral organ abscission; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9337431..9338075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113464.3 → NP_566774.1  inflorescence deficient in abscission (IDA)-like 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566774.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q29PV4, Q8LDA6
    UniProtKB/TrEMBL
    A0A178VF63, A0A5S9XFK5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q29PV4.1

Gene LinkOut

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