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PF3D7_0907700 proteasome activator 28 subunit beta, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 813354, updated on 10-Sep-2023

Summary

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Gene symbol
PF3D7_0907700
Gene description
proteasome activator 28 subunit beta, putative
Locus tag
PF3D7_0907700
Gene type
protein coding
RNA name
proteasome activator 28 subunit beta, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_004330.2 (364069..364908, complement)

Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene conserved protein, unknown function Neighboring gene translation initiation factor SUI1, putative Neighboring gene ribosomal protein L35, apicoplast, putative Neighboring gene peptide deformylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004330.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The structure of the PA28-20S proteasome complex from Plasmodium falciparum and implications for proteostasis. Xie SC, et al. Nat Microbiol, 2019 Nov. PMID 31384003
  2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables endopeptidase activator activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of endopeptidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within regulation of proteasomal protein catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to xenobiotic stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus HDA PubMed 
part_of proteasome activator complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
proteasome activator 28 subunit beta, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004330.2 Reference assembly

    Range
    364069..364908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001351913.1 → XP_001351949.1  proteasome activator 28 subunit beta, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001351949.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V6K5, A0A024W853, A0A024X8I7, A0A0L1IAU7, A0A0L7K5N4, A0A0L7M5B3, Q8I374, W4IH64, W4J096, W7FFI4, W7FQW9, W7JDC6, W7JNW1
    Conserved Domains (1) summary
    pfam02252
    Location:132 → 274
    PA28_beta; Proteasome activator pa28 beta subunit
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
6MUV_c.1
6MUV_d.1
6MUV_e.1
6MUV_f.1
6MUV_g.1
6MUV_h.1
6MUV_i.1
6MUV_j.1
6MUV_k.1
6MUV_l.1
6MUV_m.1
6MUV_n.1
6MUV_o.1
6MUV_p.1
6MUX_c.1
6MUX_d.1
6MUX_e.1
6MUX_f.1
6MUX_g.1
6MUX_h.1
6MUX_i.1

Gene LinkOut

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