My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    Pjdr2_0638 AraC family transcriptional regulator [ Paenibacillus sp. JDR-2 ]

    Gene ID: 8129685, updated on 5-Feb-2012
    Help top of page

    Summary

    Gene symbol
    Pjdr2_0638
    Gene description
    AraC family transcriptional regulator
    Locus tag
    Pjdr2_0638
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Paenibacillus sp. JDR-2 (strain: JDR-2)
    Lineage
    Bacteria; Firmicutes; Bacillales; Paenibacillaceae; Paenibacillus
    Help top of page

    Genomic context

    Sequence :
    NC_012914.1 (741524..742417)

    NC_012914.1Genomic Context describing neighboring genes Neighboring gene glycoside hydrolase family protein Neighboring gene ThiJ/PfpI domain-containing protein Neighboring gene PadR family transcriptional regulator Neighboring gene hypothetical protein

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    General protein information

    Names
    AraC family transcriptional regulator
    YP_003009404.1
    • PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: bha:BH3506 AraC/XylS family transcriptional regulator
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012914.1

      Range
      741524..742417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003009404.1 AraC family transcriptional regulator [Paenibacillus sp. JDR-2]

      UniProtKB/TrEMBL
      C6CRA3
      Conserved Domains (3) summary
      pfam00165
      Location:79 – 115
      Blast Score: 85
      HTH_AraC; Bacterial regulatory helix-turn-helix proteins, AraC family
      PRK15121
      Location:40 – 156
      Blast Score: 231
      PRK15121; right oriC-binding transcriptional activator; Provisional
      cl01368
      Location:144 – 297
      Blast Score: 274
      GyrI-like; GyrI-like small molecule binding domain
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic CP001656.1 ACS99317.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    EDS53504.1 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...