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PF3D7_1143100 AP2 domain transcription factor AP2-O, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 810987, updated on 10-Sep-2023

Summary

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Gene symbol
PF3D7_1143100
Gene description
AP2 domain transcription factor AP2-O, putative
Locus tag
PF3D7_1143100
Gene type
protein coding
RNA name
AP2 domain transcription factor AP2-O, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 11
Exon count:
1
Sequence:
Chromosome: 11; NC_037282.1 (1720047..1724861, complement)

Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene alpha/beta hydrolase, putative Neighboring gene DnaJ protein, putative Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC1, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037282.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor PfAP2-O Influences Virulence Gene Transcription and Sexual Development in Plasmodium falciparum. Cubillos EFG, et al. Front Cell Infect Microbiol, 2021. PMID 34268135, Free PMC Article
  2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
AP2 domain transcription factor AP2-O, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037282.1 Reference assembly

    Range
    1720047..1724861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348075.1 → XP_001348111.1  AP2 domain transcription factor AP2-O, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348111.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0L7KFX4, Q8IHT5, W7KDX7
    Conserved Domains (1) summary
    pfam00847
    Location:1367 → 1415
    AP2; AP2 domain
Nucleotide Protein
Heading Accession and Version

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