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LOC8081935 growth-regulating factor 1 [ Sorghum bicolor (sorghum) ]

Gene ID: 8081935, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8081935
Gene description
growth-regulating factor 1
Locus tag
SORBI_3004G317000
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 4 NC_012873.2 (65266970..65269012, complement)

Chromosome 4 - NC_012873.2Genomic Context describing neighboring genes Neighboring gene replication protein A 70 kDa DNA-binding subunit A Neighboring gene ubiquitin-like protein ATG12 Neighboring gene uncharacterized LOC8081936 Neighboring gene LRR receptor-like serine/threonine-protein kinase ERECTA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012873.2 Chromosome 4 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth-regulating factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012873.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    65266970..65269012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002454606.2 → XP_002454651.1  growth-regulating factor 1 isoform X2

    See identical proteins and their annotated locations for XP_002454651.1

    UniProtKB/TrEMBL
    A0A921UK43, C5XTK5
    Conserved Domains (2) summary
    pfam08879
    Location:90 → 131
    WRC
    pfam08880
    Location:18 → 52
    QLQ

  2. XM_021460514.1 → XP_021316189.1  growth-regulating factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A194YSJ1, A0A921UK63
    Conserved Domains (2) summary
    pfam08879
    Location:90 → 131
    WRC
    pfam08880
    Location:18 → 52
    QLQ
Nucleotide Protein
Heading Accession and Version

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