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LOC8057594 polyphenol oxidase I, chloroplastic [ Sorghum bicolor (sorghum) ]

Gene ID: 8057594, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8057594
Gene description
polyphenol oxidase I, chloroplastic
Locus tag
SORBI_3006G181300
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
Also known as
06PPO1
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Genomic context

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See LOC8057594 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 6 NC_012875.2 (53592368..53594839)

Chromosome 6 - NC_012875.2Genomic Context describing neighboring genes Neighboring gene protein indeterminate-domain 5, chloroplastic Neighboring gene protein argonaute 1B Neighboring gene polyphenol oxidase I, chloroplastic Neighboring gene eukaryotic translation initiation factor 3 subunit G

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012875.2 Chromosome 6 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catechol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pigment biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyphenol oxidase I, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012875.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    53592368..53594839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002446899.2 → XP_002446944.1  polyphenol oxidase I, chloroplastic

    See identical proteins and their annotated locations for XP_002446944.1

    UniProtKB/TrEMBL
    A0A023PMD2, A0A921QRZ4, C5YE18
    Conserved Domains (3) summary
    pfam12143
    Location:432 → 564
    PPO1_KFDV; Protein of unknown function (DUF_B2219)
    pfam00264
    Location:152 → 361
    Tyrosinase; Common central domain of tyrosinase
    pfam12142
    Location:367 → 418
    PPO1_DWL; Polyphenol oxidase middle domain
Nucleotide Protein
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