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Pofut2 protein O-fucosyltransferase 2 [ Mus musculus (house mouse) ]

Gene ID: 80294, updated on 27-Jun-2015
Official Symbol
Pofut2provided by MGI
Official Full Name
protein O-fucosyltransferase 2provided by MGI
Primary source
MGI:MGI:1916863
See related
Ensembl:ENSMUSG00000020260
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
FUT13; AI256847; BC003494; C21orf80; 2310011G23Rik
Orthologs
See Pofut2 in Epigenomics, MapViewer
Location:
10; 10 C1
Exon count:
9
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 10 NC_000076.6 (77259300..77269586)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (76722045..76732331)

Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 40703 Neighboring gene predicted gene 10941 Neighboring gene adenosine deaminase, RNA-specific, B1 Neighboring gene predicted gene, 17769

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (3) 
  • Streptomycin biosynthesis, organism-specific biosystem (from KEGG)
    Streptomycin biosynthesis, organism-specific biosystemStreptomycin is an aminocyclitol-aminoglycoside antibiotic produced by Streptomyces griseus. Streptomycin consists of aminocyclitol (streptidine), 6-deoxyhexose (streptose), and N-methyl-L-glucosamin...
  • Streptomycin biosynthesis, organism-specific biosystem (from KEGG)
    Streptomycin biosynthesis, organism-specific biosystemStreptomycin is an aminocyclitol-aminoglycoside antibiotic produced by Streptomyces griseus. Streptomycin consists of aminocyclitol (streptidine), 6-deoxyhexose (streptose), and N-methyl-L-glucosamin...
  • Streptomycin biosynthesis, organism-specific biosystem (from KEGG)
    Streptomycin biosynthesis, organism-specific biosystemStreptomycin is an aminocyclitol-aminoglycoside antibiotic produced by Streptomyces griseus. Streptomycin consists of aminocyclitol (streptidine), 6-deoxyhexose (streptose), and N-methyl-L-glucosamin...
  • Streptomycin biosynthesis, organism-specific biosystem (from KEGG)
    Streptomycin biosynthesis, organism-specific biosystemStreptomycin is an aminocyclitol-aminoglycoside antibiotic produced by Streptomyces griseus. Streptomycin consists of aminocyclitol (streptidine), 6-deoxyhexose (streptose), and N-methyl-L-glucosamin...
  • Streptomycin biosynthesis, organism-specific biosystem (from KEGG)
    Streptomycin biosynthesis, organism-specific biosystemStreptomycin is an aminocyclitol-aminoglycoside antibiotic produced by Streptomyces griseus. Streptomycin consists of aminocyclitol (streptidine), 6-deoxyhexose (streptose), and N-methyl-L-glucosamin...
  • Streptomycin biosynthesis, organism-specific biosystem (from KEGG)
    Streptomycin biosynthesis, organism-specific biosystemStreptomycin is an aminocyclitol-aminoglycoside antibiotic produced by Streptomyces griseus. Streptomycin consists of aminocyclitol (streptidine), 6-deoxyhexose (streptose), and N-methyl-L-glucosamin...

Markers

Clone Names

  • MGC6943, MGC25565

Gene Ontology Provided by MGI

Function Evidence Code Pubs
fucosyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
peptide-O-fucosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
peptide-O-fucosyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring glycosyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 
fucosylation IDA
Inferred from Direct Assay
more info
PubMed 
fucosylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
mesoderm formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein O-linked fucosylation IBA
Inferred from Biological aspect of Ancestor
more info
 
protein O-linked fucosylation ISO
Inferred from Sequence Orthology
more info
 
regulation of epithelial to mesenchymal transition IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of secretion ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
GDP-fucose protein O-fucosyltransferase 2
Names
GDP-fucose protein O-fucosyltransferase 2
O-FucT-2
peptide-O-fucosyltransferase 2
NP_084538.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030262.3NP_084538.2  GDP-fucose protein O-fucosyltransferase 2 precursor

    See identical proteins and their annotated locations for NP_084538.2

    Status: VALIDATED

    Source sequence(s)
    AF455270, AK148244, CO814561
    Consensus CDS
    CCDS23954.1
    UniProtKB/TrEMBL
    B2RV73
    UniProtKB/Swiss-Prot
    Q8VHI3
    Related
    ENSMUSP00000020493, ENSMUST00000020493
    Conserved Domains (2) summary
    cd11298
    Location:45414
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
    pfam10250
    Location:46408
    O-FucT; GDP-fucose protein O-fucosyltransferase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000076.6 Reference GRCm38.p3 C57BL/6J

    Range
    77259300..77269586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_380457.2 RNA Sequence

Alternate Mm_Celera

Genomic

  1. AC_000032.1 Alternate Mm_Celera

    Range
    78303122..78313408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)