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    WDR26 WD repeat domain 26 [ Homo sapiens ]

    Gene ID: 80232, updated on 11-May-2012

    Summary

    Official Symbol
    WDR26provided by HGNC
    Official Full Name
    WD repeat domain 26provided by HGNC
    Primary source
    HGNC:21208
    Locus tag
    PRO0852
    See related
    Ensembl:ENSG00000162923; HPRD:18298; Vega:OTTHUMG00000037636
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CDW2; MIP2; FLJ21016
    Summary
    This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. Two transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

    Genomic context

    Location :
    1q42.13
    Sequence :
    Chromosome: 1; NC_000001.10 (224572845..224622001, complement)
    See WDR26 in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene nuclear VCP-like Neighboring gene microRNA 320b-2 Neighboring gene cornichon homolog 4 (Drosophila) Neighboring gene microRNA 4742 Neighboring gene uncharacterized LOC100506354 Neighboring gene aldehyde reductase family 1, member B1 pseudogene 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:123195 BioGRID:114029 CUL4A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:123195 BioGRID:114028 CUL4B    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:123195 BioGRID:116298 FAF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:116806 FAF2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:111583 MAPK6    BioGRID  PubMed Two-hybrid 
    BioGRID:123195 BioGRID:114054 RAE1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:117507 UBXN7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:1678002 UL27    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:128522 USP12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:122327 USP46    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:123195 BioGRID:116272 WDR5    BioGRID  PubMed Affinity Capture-Western 

    General gene information

    Markers

    Homology

    • Homologs of the WDR26 gene: The WDR26 gene is conserved in chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.pombe, A.thaliana, and P.falciparum.
    • Map Viewer (Mouse, Rat)

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    WD repeat-containing protein 26
    Names
    WD repeat-containing protein 26
    CUL4- and DDB1-associated WDR protein 2
    myocardial ischemic preconditioning upregulated protein 2
    myocardial ischemic preconditioning up-regulated protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001115113.2NP_001108585.2  WD repeat-containing protein 26 isoform b

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site at the end of an exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
      Source sequence(s)
      AC099790, AY221751, BF509638, BU673957, CN283908
      UniProtKB/Swiss-Prot
      Q9H7D7
      Conserved Domains (1) summary
      cd00200
      Location:333625
      Blast Score: 393
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    2. NM_025160.6NP_079436.4  WD repeat-containing protein 26 isoform a

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
      Source sequence(s)
      AB209887, AC099790, BU673957, CN283908
      Consensus CDS
      CCDS31037.2
      UniProtKB/Swiss-Prot
      Q9H7D7
      Related
      ENSP00000408108, OTTHUMP00000035756, ENST00000414423, OTTHUMT00000091760
      Conserved Domains (1) summary
      cd00200
      Location:349641
      Blast Score: 393
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p5 Primary Assembly

      Range
      224572845..224622001, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      195092877..195142018, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC099790.3 (41644..90164) None
    genomic CH471098.1 EAW69720.1
      EAW69721.1
      EAW69722.1
      EAW69723.1
      EAW69724.1
    mRNA AB209887.1 BAD93124.1
    mRNA AK023023.1 None
    mRNA AK024669.1 BAB14955.1
    mRNA AK027236.1 None
    mRNA AK225061.1 None
    mRNA AK299230.1 BAG61262.1
    mRNA AK307909.1 None
    mRNA AY221751.1 AAO67709.1
    mRNA AY304473.1 AAQ74770.1
    mRNA BC031471.2 AAH31471.2
    mRNA BC034498.1 AAH34498.1
    mRNA BC041978.1 None
    mRNA BC052301.1 AAH52301.2
    mRNA BC063817.1 AAH63817.2
    mRNA BF509638.1 None
    mRNA BG744504.1 None
    mRNA BU673957.1 None
    mRNA CF786114.1 None
    mRNA CN283908.1 None
    mRNA CT002105.1 None
    mRNA EF011612.1 ABK41102.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9H7D7.3 GenPept UniProtKB/Swiss-Prot:Q9H7D7

      Supplemental Content

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