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VCPIP1 valosin containing protein interacting protein 1 [ Homo sapiens (human) ]

Gene ID: 80124, updated on 24-May-2016
Official Symbol
VCPIP1provided by HGNC
Official Full Name
valosin containing protein interacting protein 1provided by HGNC
Primary source
HGNC:HGNC:30897
See related
Ensembl:ENSG00000175073 HPRD:15645; MIM:611745; Vega:OTTHUMG00000164560
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DUBA3; VCIP135
Orthologs
Location:
8q13
Exon count:
3
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 8 NC_000008.11 (66630253..66667217, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (67542488..67579452, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene MYB proto-oncogene like 1 Neighboring gene uncharacterized LOC105375884 Neighboring gene C8orf44-SGK3 readthrough Neighboring gene chromosome 8 open reading frame 44 Neighboring gene serum/glucocorticoid regulated kinase family member 3 Neighboring gene pituitary tumor-transforming 3, pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ23132, FLJ60694, KIAA1850, DKFZp686G038

Gene Ontology Provided by GOA

Function Evidence Code Pubs
thiol-dependent ubiquitin-specific protease activity IDA
Inferred from Direct Assay
more info
PubMed 
thiol-dependent ubiquitin-specific protease activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
Golgi reassembly IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum membrane fusion IEA
Inferred from Electronic Annotation
more info
 
mitotic nuclear division IEA
Inferred from Electronic Annotation
more info
 
protein K11-linked deubiquitination IDA
Inferred from Direct Assay
more info
PubMed 
protein K48-linked deubiquitination IDA
Inferred from Direct Assay
more info
PubMed 
protein ubiquitination ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
Golgi stack IEA
Inferred from Electronic Annotation
more info
 
cytoplasm IDA
Inferred from Direct Assay
more info
 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
deubiquitinating protein VCIP135
Names
VCP/p47 complex-interacting 135-kDa protein
valosin containing protein (p97)/p47 complex interacting protein 1
valosin-containing protein (p97)/p47 complex-interacting protein p135
valosin-containing protein p97/p47 complex-interacting protein 1
valosin-containing protein p97/p47 complex-interacting protein p135
NP_079330.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025054.4NP_079330.2  deubiquitinating protein VCIP135

    See identical proteins and their annotated locations for NP_079330.2

    Status: VALIDATED

    Source sequence(s)
    AC090154
    Consensus CDS
    CCDS6192.1
    UniProtKB/Swiss-Prot
    Q96JH7
    Related
    ENSP00000309031, OTTHUMP00000226960, ENST00000310421, OTTHUMT00000379227
    Conserved Domains (1) summary
    pfam02338
    Location:215355
    OTU; OTU-like cysteine protease

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p2 Primary Assembly

    Range
    66630253..66667217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018919.2 Alternate CHM1_1.1

    Range
    67597370..67634328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)