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    NT01EI_0519 restriction modification system DNA specificity domain protein [ Edwardsiella ictaluri 93-146 ]

    Gene ID: 7961545, updated on 18-Nov-2012
    Gene symbol
    NT01EI_0519
    Gene description
    restriction modification system DNA specificity domain protein
    Locus tag
    NT01EI_0519
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Edwardsiella ictaluri 93-146 (strain: 93-146)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella
    Sequence :
    NC_012779.2 (513562..514887)

    NC_012779.2Genomic Context describing neighboring genes Neighboring gene formate acetyltransferase 3, putative Neighboring gene N-6 DNA Methylase Neighboring gene Type III restriction enzyme, res subunit Neighboring gene tRNA Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of Edwardsiella ictaluri 93-146, a strain associated with a natural channel catfish outbreak of enteric septicemia of catfish. Williams ML, et al. J Bacteriol, 2012 Feb. PMID 22247535.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    restriction modification system DNA specificity domain protein
    YP_002931988.1
    • restriction modification system DNA specificity domain protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012779.2

      Range
      513562..514887
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002931988.1 restriction modification system DNA specificity domain protein [Edwardsiella ictaluri 93-146]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C5BH70
      Conserved Domains (2) summary
      COG0732
      Location:25 – 419
      Blast Score: 159
      HsdS; Restriction endonuclease S subunits [Defense mechanisms]
      pfam01420
      Location:22 – 159
      Blast Score: 165
      Methylase_S; Type I restriction modification DNA specificity domain
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001600.2 ACR67753.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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