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    rluC 23S rRNA pseudouridylate synthase C [ Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 ]

    Gene ID: 7948441, updated on 30-Mar-2013
    Gene symbol
    rluC
    Gene description
    23S rRNA pseudouridylate synthase C
    Locus tag
    KP1_2075
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (strain: NTUH-K2044, serotype: K1, old-name: Klebsiella pneumoniae NTUH-K2044)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella
    Location :
    isolation source: isolated from blood of a patient with liver abscess and meningitis
    Sequence :
    NC_012731.1 (2022919..2023872)

    NC_012731.1Genomic Context describing neighboring genes Neighboring gene LysR family transcriptional regulator Neighboring gene ribonuclease E Neighboring gene Maf-like protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequencing and comparative analysis of Klebsiella pneumoniae NTUH-K2044, a strain causing liver abscess and meningitis. Wu KM, et al. J Bacteriol, 2009 Jul. PMID 19447910.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    23S rRNA pseudouridylate synthase C
    YP_002918854.1
    • catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012731.1

      Range
      2022919..2023872
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002918854.1 23S rRNA pseudouridylate synthase C [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4X6M9
      Conserved Domains (3) summary
      PRK11025
      Location:1 – 317
      Blast Score: 1603
      PRK11025; 23S rRNA pseudouridylate synthase C; Provisional
      cd02869
      Location:102 – 287
      Blast Score: 519
      PseudoU_synth_RluCD_like; Pseudouridine synthase, RsuA/RluD family
      cd00165
      Location:20 – 106
      Blast Score: 105
      S4; S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized ...
    Nucleotide Protein
    Heading Accession and Version
    genomic AP006725.1 BAH62787.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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