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LDHA lactate dehydrogenase A [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 791112, updated on 16-Nov-2023

Summary

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Gene symbol
LDHA
Gene description
lactate dehydrogenase A
See related
Ensembl:ENSOANG00000048733
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LDHA in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 3 NC_041730.1 (7955019..7964410, complement)

Chromosome 3 - NC_041730.1Genomic Context describing neighboring genes Neighboring gene tumor susceptibility 101 Neighboring gene L-lactate dehydrogenase A chain-like Neighboring gene general transcription factor IIH subunit 1 Neighboring gene HPS5 biogenesis of lysosomal organelles complex 2 subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041730.1 Chromosome 3 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lactate dehydrogenase A as a highly abundant eye lens protein in platypus (Ornithorhynchus anatinus): upsilon (upsilon)-crystallin. van Rheede T, et al. Mol Biol Evol, 2003 Jun. PMID 12716980

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-lactate dehydrogenase A chain
Names
upsilon-crystallin
NP_001121092.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127620.1 → NP_001121092.1  L-lactate dehydrogenase A chain

    See identical proteins and their annotated locations for NP_001121092.1

    Status: PROVISIONAL

    Source sequence(s)
    AF545182
    UniProtKB/TrEMBL
    A0A6I8PC18, Q7YQK6
    Related
    ENSOANP00000050321.1, ENSOANT00000071433.1
    Conserved Domains (2) summary
    cd05293
    Location:19 → 329
    LDH_1; A subgroup of L-lactate dehydrogenases
    TIGR01771
    Location:25 → 324
    L-LDH-NAD; L-lactate dehydrogenase

RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041730.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    7955019..7964410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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