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CRIPTO cripto, EGF-CFC family member [ Bos taurus (cattle) ]

Gene ID: 784029, updated on 5-Mar-2024

Summary

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Gene symbol
CRIPTO
Gene description
cripto, EGF-CFC family member
See related
BGD:BT10675; Ensembl:ENSBTAG00000021119
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TDGF1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (52867447..52872211, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 2 receptor 409 pseudogene Neighboring gene family with sequence similarity 240 member A Neighboring gene leucine rich repeat containing 2 Neighboring gene receptor transporter protein 3 Neighboring gene lactotransferrin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Cripto; teratocarcinoma-derived growth factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080358.1 → NP_001073827.1  protein Cripto precursor

    See identical proteins and their annotated locations for NP_001073827.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021740
    UniProtKB/TrEMBL
    F1N004, Q58D57
    Related
    ENSBTAP00000028139.6, ENSBTAT00000028139.6
    Conserved Domains (2) summary
    cd00054
    Location:78 → 102
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam09443
    Location:110 → 144
    CFC; Cripto_Frl-1_Cryptic (CFC)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    52867447..52872211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015459679.3 → XP_015315165.2  teratocarcinoma-derived growth factor 1 isoform X1

    UniProtKB/TrEMBL
    F1N004, Q58D57
    Conserved Domains (2) summary
    cd00054
    Location:78 → 102
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam09443
    Location:110 → 144
    CFC; Cripto_Frl-1_Cryptic (CFC)
Nucleotide Protein Strain
Heading Accession and Version

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