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neu3.1 sialidase 3 (membrane sialidase), tandem duplicate 1 [ Danio rerio (zebrafish) ]

Gene ID: 780844, updated on 29-Dec-2015
Official Symbol
neu3.1provided by ZNC
Official Full Name
sialidase 3 (membrane sialidase), tandem duplicate 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-061201-39
See related
Ensembl:ENSDARG00000096382; Vega:OTTDARG00000037391
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
im:7158396; zgc:158400
See neu3.1 in MapViewer
Location:
chromosome: 21
Exon count:
3
Annotation release Status Assembly Chr Location
104 current GRCz10 (GCF_000002035.5) 21 NC_007132.6 (21754847..21758135)
103 previous assembly Zv9 (GCF_000002035.4) 21 NC_007132.5 (20743214..20746642)

Chromosome 21 - NC_007132.6Genomic Context describing neighboring genes Neighboring gene chordin-like 2 Neighboring gene X-ray radiation resistance associated 1 Neighboring gene sialidase 3 (membrane sialidase), tandem duplicate 2 Neighboring gene sialidase 3 (membrane sialidase), tandem duplicate 3

Homology

  • Homologs of the neu3.1 gene: The neu3.1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, and frog.

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
exo-alpha-sialidase activity IDA
Inferred from Direct Assay
more info
PubMed 
exo-alpha-sialidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
ganglioside metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
sialidase 3 (membrane sialidase), tandem duplicate 1
Names
sialidase 3, tandem duplicate 1
sialidase 3.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079665.1NP_001073133.1  sialidase 3 (membrane sialidase), tandem duplicate 1

    See identical proteins and their annotated locations for NP_001073133.1

    Status: PROVISIONAL

    Source sequence(s)
    BC127592
    UniProtKB/TrEMBL
    A0PJS4
    Related
    ENSDARP00000125766, OTTDARP00000041975, ENSDART00000151759, OTTDART00000053351
    Conserved Domains (2) summary
    pfam13088
    Location:40364
    BNR_2; BNR repeat-like domain
    cd15482
    Location:17386
    Sialidase_non-viral; Non-viral sialidases

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz10 Primary Assembly

Genomic

  1. NC_007132.6 Reference GRCz10 Primary Assembly

    Range
    21754847..21758135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005161205.2XP_005161262.1  

    UniProtKB/TrEMBL
    I3ITP7
    Related
    ENSDARP00000126320, OTTDARP00000041974, ENSDART00000151654, OTTDART00000053350
    Conserved Domains (2) summary
    pfam13088
    Location:44368
    BNR_2; BNR repeat-like domain
    cd15482
    Location:21390
    Sialidase_non-viral; Non-viral sialidases