U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mak male germ cell associated kinase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 780268, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
makprovided by Xenbase
Official Full Name
male germ cell associated kinaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-490935
See related
Ensembl:ENSXETG00000001069
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
rp62; xmak
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See mak in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (90555417..90584603, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (84579271..84616022, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 14C Neighboring gene TBC1 domain family member 7 Neighboring gene glial cells missing homolog 2 Neighboring gene uncharacterized LOC116411528 Neighboring gene synaptonemal complex protein 2 like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC82717, MGC146434

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intraciliary transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within motile cilium assembly IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
serine/threonine-protein kinase MAK
NP_001072807.1
XP_012820404.1
XP_012820405.1
XP_012820406.1
XP_017950196.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079339.1 → NP_001072807.1  serine/threonine-protein kinase MAK

    See identical proteins and their annotated locations for NP_001072807.1

    Status: PROVISIONAL

    Source sequence(s)
    BC121444
    UniProtKB/TrEMBL
    F6RS11, Q0V9P7
    Related
    ENSXETP00000002325.5, ENSXETT00000002325.5
    Conserved Domains (1) summary
    cd07830
    Location:4 → 284
    STKc_MAK_like; Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    90555417..90584603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964951.3 → XP_012820405.1  serine/threonine-protein kinase MAK isoform X2

    UniProtKB/TrEMBL
    A0A8J0SQ78, F6RS11
    Conserved Domains (2) summary
    smart00220
    Location:4 → 285
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd07830
    Location:4 → 285
    STKc_MAK_like; Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

  2. XM_018094707.2 → XP_017950196.1  serine/threonine-protein kinase MAK isoform X4

    UniProtKB/TrEMBL
    A0A8J0T3K2, F6RS11

  3. XM_012964950.3 → XP_012820404.1  serine/threonine-protein kinase MAK isoform X1

    UniProtKB/TrEMBL
    A0A6I8PNA6, F6RS11
    Related
    ENSXETP00000060417.2, ENSXETT00000063967.3
    Conserved Domains (1) summary
    cd07830
    Location:4 → 285
    STKc_MAK_like; Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

  4. XM_012964952.3 → XP_012820406.1  serine/threonine-protein kinase MAK isoform X3

    UniProtKB/TrEMBL
    A0A8J0SRH3, F6RS11
    Conserved Domains (1) summary
    cd07830
    Location:4 → 284
    STKc_MAK_like; Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.