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ccdc69 coiled-coil domain containing 69 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 780085, updated on 5-Mar-2024

Summary

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Official Symbol
ccdc69provided by Xenbase
Official Full Name
coiled-coil domain containing 69provided by Xenbase
Primary source
Xenbase:XB-GENE-999147
See related
Ensembl:ENSXETG00000019409
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ccdc69-a; ccdc69-b
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (17474120..17496295)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (10969658..10991778, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene ganglioside GM2 activator Neighboring gene uncharacterized LOC100495195 Neighboring gene gem nuclear organelle associated protein 5 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene sarcoglycan delta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC147153

General protein information

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Preferred Names
coiled-coil domain-containing protein 69

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079161.1 → NP_001072629.1  coiled-coil domain-containing protein 69

    See identical proteins and their annotated locations for NP_001072629.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123063
    UniProtKB/Swiss-Prot
    Q0IHN7
    UniProtKB/TrEMBL
    A0A6I8QN37
    Related
    ENSXETP00000042070.3, ENSXETT00000042070.5
    Conserved Domains (1) summary
    TIGR02168
    Location:12 → 245
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    17474120..17496295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0IHN7.1 GenPept UniProtKB/Swiss-Prot:Q0IHN7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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