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dok4 docking protein 4 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 780013, updated on 5-Mar-2024

Summary

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Official Symbol
dok4provided by Xenbase
Official Full Name
docking protein 4provided by Xenbase
Primary source
Xenbase:XB-GENE-948694
See related
Ensembl:ENSXETG00000013782
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See dok4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (76252470..76275329)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (28200736..28223722)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene zona pellucida protein D Neighboring gene adhesion G protein-coupled receptor G1 Neighboring gene coiled-coil domain containing 102A Neighboring gene polymerase (RNA) II (DNA directed) polypeptide C, 33kDa Neighboring gene coenzyme Q9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC147494

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
docking protein 4
Names
downstream of tyrosine kinase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079090.1 → NP_001072558.1  docking protein 4

    See identical proteins and their annotated locations for NP_001072558.1

    Status: PROVISIONAL

    Source sequence(s)
    BC122076
    UniProtKB/TrEMBL
    A0A6I8S0D7, Q0D2A1
    Related
    ENSXETP00000079195.2, ENSXETT00000088225.2
    Conserved Domains (2) summary
    cd13164
    Location:133 → 235
    PTB_DOK4_DOK5_DOK6; Downstream of tyrosine kinase 4, 5, and 6 proteins phosphotyrosine-binding domain (PTBi)
    cd14678
    Location:9 → 113
    PH_DOK4_DOK5_DOK6; Pleckstrin homology (PH) domain of Downstream of tyrosine kinase 4, 5, and 6 proteins

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    76252470..76275329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031900209.1 → XP_031756069.1  docking protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A6I8S0D7, A0A7D9NKJ2
    Related
    ENSXETP00000030181.4, ENSXETT00000030181.4
    Conserved Domains (2) summary
    cd13164
    Location:116 → 218
    PTB_DOK4_DOK5_DOK6; Downstream of tyrosine kinase 4, 5, and 6 proteins phosphotyrosine-binding domain (PTBi)
    cd14678
    Location:6 → 96
    PH_DOK4_DOK5_DOK6; Pleckstrin homology (PH) domain of Downstream of tyrosine kinase 4, 5, and 6 proteins

  2. XM_012961341.3 → XP_012816795.2  docking protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A6I8S0D7, A0A8J0SKJ2
    Related
    ENSXETP00000088388.2, ENSXETT00000088473.2
    Conserved Domains (2) summary
    cd13164
    Location:156 → 258
    PTB_DOK4_DOK5_DOK6; Downstream of tyrosine kinase 4, 5, and 6 proteins phosphotyrosine-binding domain (PTBi)
    cd14678
    Location:37 → 136
    PH_DOK4_DOK5_DOK6; Pleckstrin homology (PH) domain of Downstream of tyrosine kinase 4, 5, and 6 proteins
Nucleotide Protein Strain
Heading Accession and Version

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