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slc35f1 solute carrier family 35 member F1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 779777, updated on 5-Mar-2024

Summary

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Official Symbol
slc35f1provided by Xenbase
Official Full Name
solute carrier family 35 member F1provided by Xenbase
Primary source
Xenbase:XB-GENE-5866569
See related
Ensembl:ENSXETG00000012876
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
slc35f2
Orthologs
human mouse all
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Genomic context

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See slc35f1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (73905169..74108073, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (70068089..70386463)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene centrosomal protein 85kDa-like Neighboring gene phospholamban Neighboring gene uncharacterized LOC100493862 Neighboring gene NUS1, dehydrodolichyl diphosphate synthase subunit Neighboring gene golgi-associated PDZ and coiled-coil motif containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC145997

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
solute carrier family 35 member F2; LOW QUALITY PROTEIN: solute carrier family 35 member F2
Names
Solute carrier family 35 member F2
solute carrier family 35, member F2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    73905169..74108073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018094310.2 → XP_017949799.2  LOW QUALITY PROTEIN: solute carrier family 35 member F2

    UniProtKB/TrEMBL
    A0A8J0T4F0
    Related
    ENSXETP00000028146.5, ENSXETT00000028146.5
    Conserved Domains (1) summary
    pfam06027
    Location:35 → 290
    SLC35F; Solute carrier family 35

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001078856.1: Suppressed sequence

    Description
    NM_001078856.1: This RefSeq was temporarily suppressed because the CDS was partial.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0V9U2.2 GenPept UniProtKB/Swiss-Prot:Q0V9U2

Gene LinkOut

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