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brd8 bromodomain containing 8 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 779589, updated on 5-Mar-2024

Summary

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Official Symbol
brd8provided by Xenbase
Official Full Name
bromodomain containing 8provided by Xenbase
Primary source
Xenbase:XB-GENE-967261
See related
Ensembl:ENSXETG00000006726
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (47816458..47841572, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (38319596..38341587, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene NEDD4 binding protein 3 Neighboring gene NHP2 ribonucleoprotein Neighboring gene kinesin family member 20A Neighboring gene cell division cycle 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
bromodomain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    47816458..47841572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004912878.4 → XP_004912935.1  bromodomain-containing protein 8 isoform X8

    UniProtKB/TrEMBL
    A0A803JJL1, A0A8J0R2A5
    Conserved Domains (1) summary
    cd05507
    Location:669 → 772
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  2. XM_004912877.4 → XP_004912934.1  bromodomain-containing protein 8 isoform X9

    UniProtKB/TrEMBL
    A0A803JKB2, A0A8J0R2P2
    Related
    ENSXETP00000108349.1, ENSXETT00000117552.1
    Conserved Domains (1) summary
    cd05507
    Location:727 → 830
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  3. XM_004912875.4 → XP_004912932.1  bromodomain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A803JKB2, F6X1Y3
    Related
    ENSXETP00000014703.5, ENSXETT00000014703.5
    Conserved Domains (1) summary
    cd05507
    Location:765 → 868
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  4. XM_018092218.2 → XP_017947707.1  bromodomain-containing protein 8 isoform X7

    UniProtKB/TrEMBL
    A0A8J0T167, Q05AZ6
    Conserved Domains (1) summary
    cd05507
    Location:596 → 699
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  5. XM_018092217.2 → XP_017947706.1  bromodomain-containing protein 8 isoform X6

    UniProtKB/TrEMBL
    A0A803J445, Q05AZ6
    Related
    ENSXETP00000102597.1, ENSXETT00000117733.1

  6. XM_012959840.3 → XP_012815294.1  bromodomain-containing protein 8 isoform X5

    UniProtKB/TrEMBL
    A0A6I8PTP1, A0A8J0SJP7
    Conserved Domains (1) summary
    cd05507
    Location:669 → 772
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  7. XM_012959838.3 → XP_012815292.1  bromodomain-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A6I8PTP1, A0A8J0SJN9
    Related
    ENSXETP00000095064.2, ENSXETT00000089562.2
    Conserved Domains (1) summary
    cd05507
    Location:727 → 830
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  8. XM_012959839.3 → XP_012815293.1  bromodomain-containing protein 8 isoform X4

    UniProtKB/TrEMBL
    A0A803JJL1, A0A8J0SIE9
    Related
    ENSXETP00000108128.1, ENSXETT00000121845.1
    Conserved Domains (1) summary
    cd05507
    Location:707 → 810
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...

  9. XM_002936836.5 → XP_002936882.2  bromodomain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A6I8PTP1, A0A8J0QPQ7
    Conserved Domains (1) summary
    cd05507
    Location:765 → 868
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
Nucleotide Protein Strain
Heading Accession and Version

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