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    NGR_c37030 PfkB family carbohydrate kinase protein [ Sinorhizobium fredii NGR234 ]

    Gene ID: 7793618, updated on 18-May-2013
    Gene symbol
    NGR_c37030
    Gene description
    PfkB family carbohydrate kinase protein
    Locus tag
    NGR_c37030
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sinorhizobium fredii NGR234 (strain: NGR234, old-name: Rhizobium sp. NGR234)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium
    Sequence :
    NC_012587.1 (3910314..3912260, complement)

    NC_012587.1Genomic Context describing neighboring genes Neighboring gene xylose isomerase domain-containing protein Neighboring gene thiamine pyrophosphate domain-containing protein Neighboring gene transcriptional regulator Neighboring gene oxidoreductase domain-containing protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems. Schmeisser C, et al. Appl Environ Microbiol, 2009 Jun. PMID 19376903.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    PfkB family carbohydrate kinase protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012587.1

      Range
      3910314..3912260, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002828177.1 PfkB family carbohydrate kinase protein [Sinorhizobium fredii NGR234]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C3MCX6
      Conserved Domains (4) summary
      pfam09863
      Location:335 – 643
      Blast Score: 1201
      DUF2090; Uncharacterized protein conserved in bacteria (DUF2090)
      COG0524
      Location:17 – 344
      Blast Score: 582
      RbsK; Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]
      COG3892
      Location:343 – 648
      Blast Score: 1214
      COG3892; Uncharacterized protein conserved in bacteria [Function unknown]
      cd01166
      Location:17 – 324
      Blast Score: 653
      KdgK; 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001389.1 ACP27424.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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