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FOXP2 forkhead box P2 [ Gallus gallus (chicken) ]

Gene ID: 769935, updated on 3-Apr-2024

Summary

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Official Symbol
FOXP2provided by CGNC
Official Full Name
forkhead box P2provided by CGNC
Primary source
CGNC:7164
See related
Ensembl:ENSGALG00010001407
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (26060300..26472682, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (26321021..26733835, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533188 Neighboring gene MyoD family inhibitor domain containing Neighboring gene uncharacterized LOC121109003 Neighboring gene uncharacterized LOC112533189 Neighboring gene uncharacterized LOC121109004 Neighboring gene protein phosphatase 1 regulatory subunit 3A Neighboring gene uncharacterized LOC121107432

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. FoxP2 protein decreases at a specific region in the chick midbrain after hatching. Bessho C, et al. Neurosci Lett, 2023 Mar 13. PMID 36773927

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. FoxP2 protein decreases at a specific region in the chick midbrain after hatching.
    Title: FoxP2 protein decreases at a specific region in the chick midbrain after hatching.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein P2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001397265.1 → NP_001384194.1  forkhead box protein P2 isoform a

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0X8C6, G8HZH9
    Related
    ENSGALP00010001718.1, ENSGALT00010003262.1
    Conserved Domains (3) summary
    COG5025
    Location:470 → 701
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:335 → 402
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:496 → 577
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  2. NM_001397266.1 → NP_001384195.1  forkhead box protein P2 isoform b

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0XB47, G8HZH8
    Related
    ENSGALP00010001722.1, ENSGALT00010003265.1
    Conserved Domains (3) summary
    COG5025
    Location:469 → 700
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:334 → 401
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:495 → 576
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  3. NM_001397267.1 → NP_001384196.1  forkhead box protein P2 isoform b

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0XB47, G8HZH8
    Conserved Domains (3) summary
    COG5025
    Location:469 → 700
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:334 → 401
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:495 → 576
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  4. NM_001397268.1 → NP_001384197.1  forkhead box protein P2 isoform b

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0XB47, G8HZH8
    Conserved Domains (3) summary
    COG5025
    Location:469 → 700
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:334 → 401
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:495 → 576
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  5. NM_001397269.1 → NP_001384198.1  forkhead box protein P2 isoform c

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    G8HZI1
    Related
    ENSGALP00010001716.1, ENSGALT00010003259.1
    Conserved Domains (3) summary
    COG5025
    Location:450 → 681
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:315 → 382
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:476 → 557
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  6. NM_001397270.1 → NP_001384199.1  forkhead box protein P2 isoform c

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    G8HZI1
    Conserved Domains (3) summary
    COG5025
    Location:450 → 681
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:315 → 382
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:476 → 557
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  7. NM_001397271.1 → NP_001384200.1  forkhead box protein P2 isoform d

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0XB05, G8HZI0
    Related
    ENSGALP00010001704.1, ENSGALT00010003247.1
    Conserved Domains (2) summary
    smart00339
    Location:476 → 548
    FH; FORKHEAD
    COG5025
    Location:449 → 680
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  8. NM_001397272.1 → NP_001384201.1  forkhead box protein P2 isoform e

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    G8HZH9
    Conserved Domains (3) summary
    COG5025
    Location:440 → 671
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:305 → 372
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:466 → 547
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  9. NM_001397273.1 → NP_001384202.1  forkhead box protein P2 isoform f

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    G8HZH8
    Conserved Domains (2) summary
    smart00339
    Location:466 → 538
    FH; FORKHEAD
    COG5025
    Location:439 → 670
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    26060300..26472682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025151566.3 → XP_025007334.1  forkhead box protein P2 isoform X7

    UniProtKB/TrEMBL
    G8HZH9
    Conserved Domains (2) summary
    cd00059
    Location:405 → 477
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
    pfam16159
    Location:243 → 310
    FOXP-CC; FOXP coiled-coil domain

  2. XM_025151568.3 → XP_025007336.1  forkhead box protein P2 isoform X7

    UniProtKB/TrEMBL
    G8HZH9
    Conserved Domains (2) summary
    cd00059
    Location:405 → 477
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
    pfam16159
    Location:243 → 310
    FOXP-CC; FOXP coiled-coil domain

  3. XM_025151569.3 → XP_025007337.1  forkhead box protein P2 isoform X9

    UniProtKB/TrEMBL
    G8HZH9
    Conserved Domains (2) summary
    cd00059
    Location:514 → 586
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
    pfam16159
    Location:352 → 419
    FOXP-CC; FOXP coiled-coil domain

  4. XM_040701928.2 → XP_040557862.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6, G8HZH9
    Conserved Domains (3) summary
    COG5025
    Location:470 → 701
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:335 → 402
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:496 → 577
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  5. XM_025151551.3 → XP_025007319.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6, G8HZH9
    Conserved Domains (3) summary
    COG5025
    Location:470 → 701
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:335 → 402
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:496 → 577
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  6. XM_046943292.1 → XP_046799248.1  forkhead box protein P2 isoform X5

  7. XM_040701976.2 → XP_040557910.1  forkhead box protein P2 isoform X4

    UniProtKB/TrEMBL
    G8HZH9
    Conserved Domains (3) summary
    COG5025
    Location:440 → 671
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:305 → 372
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:466 → 547
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  8. XM_025151542.3 → XP_025007310.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6, G8HZH9
    Conserved Domains (3) summary
    COG5025
    Location:470 → 701
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:335 → 402
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:496 → 577
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  9. XM_046943289.1 → XP_046799245.1  forkhead box protein P2 isoform X3

  10. XM_040701954.2 → XP_040557888.1  forkhead box protein P2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XB47, G8HZH8
    Conserved Domains (3) summary
    COG5025
    Location:469 → 700
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:334 → 401
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:495 → 576
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  11. XM_040701946.2 → XP_040557880.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6, G8HZH9
    Conserved Domains (3) summary
    COG5025
    Location:470 → 701
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:335 → 402
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:496 → 577
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  12. XM_040701983.1 → XP_040557917.1  forkhead box protein P2 isoform X6

    UniProtKB/TrEMBL
    A0A8V0X8B7, G8HZI1
    Related
    ENSGALP00010001708.1, ENSGALT00010003251.1
    Conserved Domains (2) summary
    smart00339
    Location:447 → 519
    FH; FORKHEAD
    COG5025
    Location:420 → 651
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  13. XM_040701995.2 → XP_040557929.1  forkhead box protein P2 isoform X8

    UniProtKB/TrEMBL
    G8HZH9
    Conserved Domains (1) summary
    smart00339
    Location:497 → 569
    FH; FORKHEAD

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    26321021..26733835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908639.1 → XP_046764595.1  forkhead box protein P2 isoform X7

  2. XM_046908640.1 → XP_046764596.1  forkhead box protein P2 isoform X7

  3. XM_046908642.1 → XP_046764598.1  forkhead box protein P2 isoform X9

  4. XM_046908630.1 → XP_046764586.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6

  5. XM_046908633.1 → XP_046764589.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6

  6. XM_046908637.1 → XP_046764593.1  forkhead box protein P2 isoform X5

  7. XM_046908636.1 → XP_046764592.1  forkhead box protein P2 isoform X4

  8. XM_046908632.1 → XP_046764588.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6

  9. XM_046908635.1 → XP_046764591.1  forkhead box protein P2 isoform X3

  10. XM_046908634.1 → XP_046764590.1  forkhead box protein P2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XB47

  11. XM_046908631.1 → XP_046764587.1  forkhead box protein P2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X8C6

  12. XM_046908638.1 → XP_046764594.1  forkhead box protein P2 isoform X6

    UniProtKB/TrEMBL
    A0A8V0X8B7

  13. XM_046908641.1 → XP_046764597.1  forkhead box protein P2 isoform X8

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001318413.1: Suppressed sequence

    Description
    NM_001318413.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
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