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GCOG8 component of oligomeric golgi complex 8 [ Gallus gallus (chicken) ]

Gene ID: 769684, updated on 5-Mar-2024

Summary

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Official Symbol
GCOG8provided by CGNC
Official Full Name
component of oligomeric golgi complex 8provided by CGNC
Primary source
CGNC:404
See related
Ensembl:ENSGALG00010008200
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
COG8
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (18576216..18581232, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (18924200..18929192, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene UTP4, small subunit processome component Neighboring gene syntrophin beta 2 Neighboring gene vacuolar protein sorting 4 homolog A Neighboring gene NIP7, nucleolar pre-rRNA processing protein Neighboring gene transmembrane p24 trafficking protein 6 Neighboring gene telomeric repeat binding factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide deformylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    18576216..18581232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040707210.2 → XP_040563144.1  conserved oligomeric Golgi complex subunit 8 isoform X3

    Conserved Domains (2) summary
    pfam04124
    Location:29 → 365
    Dor1; Dor1-like family
    cl00234
    Location:504 → 543
    Pep_deformylase; Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe(II) ...

  2. XM_040707209.2 → XP_040563143.1  conserved oligomeric Golgi complex subunit 8 isoform X2

    Conserved Domains (1) summary
    pfam04124
    Location:3 → 258
    Dor1; Dor1-like family

  3. XM_025154246.3 → XP_025010014.2  conserved oligomeric Golgi complex subunit 8 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XSI4
    Related
    ENSGALP00010011163.1, ENSGALT00010019615.1
    Conserved Domains (1) summary
    pfam04124
    Location:29 → 365
    Dor1; Dor1-like family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    18924200..18929192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040681182.2 → XP_040537116.1  conserved oligomeric Golgi complex subunit 8 isoform X3

    Conserved Domains (2) summary
    pfam04124
    Location:29 → 365
    Dor1; Dor1-like family
    cl00234
    Location:504 → 543
    Pep_deformylase; Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe(II) ...

  2. XM_040681181.2 → XP_040537115.1  conserved oligomeric Golgi complex subunit 8 isoform X2

    Conserved Domains (1) summary
    pfam04124
    Location:3 → 258
    Dor1; Dor1-like family

  3. XM_040681180.2 → XP_040537114.1  conserved oligomeric Golgi complex subunit 8 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XSI4
    Conserved Domains (1) summary
    pfam04124
    Location:29 → 365
    Dor1; Dor1-like family
Nucleotide Protein
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