argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] - Gene

Summary

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Gene symbol: argD
Gene description: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
Locus tag: SPC_3537
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 (strain: RKS4594, serovar: Paratyphi C, sub-species: enterica)
Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella

Genomic context

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Sequence :: NC_012125.1 (3551368..3552585, complement)

NC_012125.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

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Bibliography

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GeneRIFs: Gene References Into Functions What's a GeneRIF?

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Pathways from BioSystems

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2-Oxocarboxylic acid metabolism, organism-specific biosystem (from KEGG)
2-Oxocarboxylic acid metabolism, organism-specific biosystem2-Oxocarboxylic acids are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxobutanedioate) and 2-oxoglutarate. This diagram illustrate...
2-Oxocarboxylic acid metabolism, conserved biosystem (from KEGG)
2-Oxocarboxylic acid metabolism, conserved biosystem2-Oxocarboxylic acids are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxobutanedioate) and 2-oxoglutarate. This diagram illustrate...
Arginine and proline metabolism, organism-specific biosystem (from KEGG)
Arginine and proline metabolism, organism-specific biosystem
Arginine and proline metabolism
Arginine and proline metabolism, conserved biosystem (from KEGG)
Arginine and proline metabolism, conserved biosystem
Arginine and proline metabolism
Biosynthesis of amino acids, organism-specific biosystem (from KEGG)
Biosynthesis of amino acids, organism-specific biosystem
Biosynthesis of amino acids
Biosynthesis of amino acids, conserved biosystem (from KEGG)
Biosynthesis of amino acids, conserved biosystem
Biosynthesis of amino acids
Biosynthesis of secondary metabolites, organism-specific biosystem (from KEGG)
Biosynthesis of secondary metabolites, organism-specific biosystem
Biosynthesis of secondary metabolites
Lysine biosynthesis, organism-specific biosystem (from KEGG)
Lysine biosynthesis, organism-specific biosystem
Lysine biosynthesis
Lysine biosynthesis, conserved biosystem (from KEGG)
Lysine biosynthesis, conserved biosystem
Lysine biosynthesis
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine, organism-specific biosystem (from KEGG)
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Lysine metabolism
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine, conserved biosystem (from KEGG)
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Lysine metabolism
Microbial metabolism in diverse environments, organism-specific biosystem (from KEGG)
Microbial metabolism in diverse environments, organism-specific biosystem
Microbial metabolism in diverse environments
Ornithine biosynthesis, glutamate => ornithine, organism-specific biosystem (from KEGG)
Ornithine biosynthesis, glutamate => ornithine, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Arginine and proline metabolism
Ornithine biosynthesis, glutamate => ornithine, conserved biosystem (from KEGG)
Ornithine biosynthesis, glutamate => ornithine, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Arginine and proline metabolism

General gene information

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General protein information

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Names: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein

YP_002639061.1

DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_012125.1

Range

3551368..3552585, complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

YP_002639061.1 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594]

Status: REVIEWED

UniProtKB/TrEMBL

C0Q0E3

Conserved Domains (2) summary

cd00610
Location:21 – 400
Blast Score: 1133

OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...

PRK05093
Location:3 – 405
Blast Score: 2178

argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed