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LOC7489677 GATA transcription factor 2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7489677, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7489677
Gene description
GATA transcription factor 2
Locus tag
POPTR_013G059600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 13 NC_037297.2 (4354464..4356279)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 13 NC_037297.1 (4460395..4462229)

Chromosome 13 - NC_037297.2Genomic Context describing neighboring genes Neighboring gene NADPH-dependent aldehyde reductase-like protein, chloroplastic Neighboring gene TATA-box-binding protein 2 Neighboring gene uncharacterized LOC112323761 Neighboring gene glucan endo-1,3-beta-glucosidase 8 Neighboring gene general negative regulator of transcription subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GATA transcription factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037297.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    4354464..4356279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002319133.4 → XP_002319169.4  GATA transcription factor 2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases