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LOC7468418 auxin response factor 18 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7468418, updated on 3-Apr-2024

Summary

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Gene symbol
LOC7468418
Gene description
auxin response factor 18
Locus tag
POPTR_010G223200v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 10 NC_037294.2 (20749545..20753176, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 10 NC_037294.1 (20732914..20736654, complement)

Chromosome 10 - NC_037294.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC7468417 Neighboring gene ubiquitin-like protein 5 Neighboring gene GATA transcription factor 8 Neighboring gene protein ENHANCED DISEASE RESISTANCE 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
auxin response factor 18
Names
ARF family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037294.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    20749545..20753176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002316334.4 → XP_002316370.4  auxin response factor 18

    UniProtKB/TrEMBL
    A0A2I4KKA0
Nucleotide Protein
Heading Accession and Version

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