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    WFS1 Wolfram syndrome 1 (wolframin) [ Homo sapiens (human) ]

    Gene ID: 7466, updated on 9-Jun-2013
    Official Symbol
    WFS1provided by HGNC
    Official Full Name
    Wolfram syndrome 1 (wolframin)provided by HGNC
    Primary source
    HGNC:12762
    See related
    Ensembl:ENSG00000109501; HPRD:05864; MIM:606201; Vega:OTTHUMG00000090431
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    WFS; WFRS; WFSL
    Summary
    This gene encodes a transmembrane protein, which is located primarily in the endoplasmic reticulum and ubiquitously expressed with highest levels in brain, pancreas, heart, and insulinoma beta-cell lines. Mutations in this gene are associated with Wolfram syndrome, also called DIDMOAD (Diabetes Insipidus, Diabetes Mellitus, Optic Atrophy, and Deafness), an autosomal recessive disorder. The disease affects the brain and central nervous system. Mutations in this gene can also cause autosomal dominant deafness 6 (DFNA6), also known as DFNA14 or DFNA38. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Mar 2009]
    Location :
    4p16.1
    Sequence :
    Chromosome: 4; NC_000004.11 (6271577..6304992)
    See WFS1 in Epigenomics, MapViewer

    Chromosome 4 - NC_000004.11Genomic Context describing neighboring genes Neighboring gene janus kinase and microtubule interacting protein 1 Neighboring gene uncharacterized LOC285484 Neighboring gene protein phosphatase 2, regulatory subunit B, gamma Neighboring gene mannosidase, alpha, class 2B, member 2

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Diabetes mellitus AND insipidus with optic atrophy AND deafness

    Summary from GeneReviews: WFS1-Related Disorders Go to GeneReviews

    Disease Characteristics
    WFS1-related disorders range from Wolfram syndrome (WFS) to WFS1-related low-frequency sensory hearing loss (also known as DFNA6/14/38 low-frequency sensorineural hearing loss [LFSNHL]). WFS is a progressive neurodegenerative disorder characterized by onset of diabetes mellitus and optic atrophy before age 15 years, and typically associated with sensorineural hearing loss, progressive neurologic abnormalities (ataxia, peripheral neuropathy, dementia, psychiatric illness, and urinary tract atony), and other endocrine abnormalities. Median age at death is 30 years. WFS-like disorder is characterized by sensorineural hearing loss, diabetes mellitus, psychiatric illness, and variable optic atrophy. WFS1-related LFSNHL is characterized by congenital, nonsyndromic, slowly progressive, low-frequency (<2000 Hz) sensorineural hearing loss.
    Diagnosis Testing
    Diagnosis of WFS and WFS-related disorder is based on clinical findings and molecular genetic testing of WFS1, the only gene associated with WFS1-related disorders. WFS1-related LFSNHL is diagnosed based on audiologic findings and molecular genetic testing.
    Genetic Counseling
    WFS is inherited in an autosomal recessive manner. At conception, each sib of an affected individual has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing is possible if the disease-causing mutations in the family are known. WFS-like disease and WSF1-related LFSNHL are inherited in an autosomal dominant manner. Risk to offspring of an affected individual is 50%. Prenatal testing for pregnancies at increased risk for all three phenotypes is possible if the disease-causing mutation(s) in the family are known.
    References

    WFS1-Related Disorders

    Summary from GeneReviews: WFS1-Related Disorders Go to GeneReviews

    Disease Characteristics
    WFS1-related disorders range from Wolfram syndrome (WFS) to WFS1-related low-frequency sensory hearing loss (also known as DFNA6/14/38 low-frequency sensorineural hearing loss [LFSNHL]). WFS is a progressive neurodegenerative disorder characterized by onset of diabetes mellitus and optic atrophy before age 15 years, and typically associated with sensorineural hearing loss, progressive neurologic abnormalities (ataxia, peripheral neuropathy, dementia, psychiatric illness, and urinary tract atony), and other endocrine abnormalities. Median age at death is 30 years. WFS-like disorder is characterized by sensorineural hearing loss, diabetes mellitus, psychiatric illness, and variable optic atrophy. WFS1-related LFSNHL is characterized by congenital, nonsyndromic, slowly progressive, low-frequency (<2000 Hz) sensorineural hearing loss.
    Diagnosis Testing
    Diagnosis of WFS and WFS-related disorder is based on clinical findings and molecular genetic testing of WFS1, the only gene associated with WFS1-related disorders. WFS1-related LFSNHL is diagnosed based on audiologic findings and molecular genetic testing.
    Genetic Counseling
    WFS is inherited in an autosomal recessive manner. At conception, each sib of an affected individual has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing is possible if the disease-causing mutations in the family are known. WFS-like disease and WSF1-related LFSNHL are inherited in an autosomal dominant manner. Risk to offspring of an affected individual is 50%. Prenatal testing for pregnancies at increased risk for all three phenotypes is possible if the disease-causing mutation(s) in the family are known.
    References

    Summary from GeneReviews: Deafness and Hereditary Hearing Loss Overview Go to GeneReviews

    Disease Characteristics
    Hereditary hearing loss and deafness may be conductive, sensorineural, or a combination of both; syndromic (associated with malformations of the external ear or other organs or with medical problems involving other organ systems) or nonsyndromic (no associated visible abnormalities of the external ear or any related medical problems); and prelingual (before language develops) or postlingual (after language develops).
    Diagnosis Testing
    Genetic forms of hearing loss must be distinguished from acquired (non-genetic) causes of hearing loss. The genetic forms of hearing loss are diagnosed by otologic, audiologic, and physical examination, family history, ancillary testing (e.g., CT examination of the temporal bone), and molecular genetic testing. Molecular genetic testing, possible for many types of syndromic and nonsyndromic deafness, plays a prominent role in diagnosis and genetic counseling.
    Genetic Counseling
    Hereditary hearing loss can be inherited in an autosomal dominant, autosomal recessive, or X-linked recessive manner, as well as by mitochondrial inheritance. Genetic counseling and risk assessment depend on accurate determination of the specific genetic diagnosis. In the absence of a specific diagnosis, empiric recurrence risk figures, coupled with GJB2 and GJB6 molecular genetic testing results, can be used for genetic counseling.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    O76024 P56537 EIF6    HPRD  PubMed  
    BioGRID:113304 BioGRID:116586 ATF6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113304 BioGRID:109898 EIF6    BioGRID  PubMed Two-hybrid 
    BioGRID:113304 BioGRID:111583 MAPK6    BioGRID  PubMed Two-hybrid 
    BioGRID:113304 BioGRID:111659 PSMA5    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113304 BioGRID:121411 SMURF1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:113304 BioGRID:124085 SYVN1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113304 BioGRID:112872 TERF1    BioGRID  PubMed Two-hybrid 
    BioGRID:113304 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    • Activation of Chaperone Genes by XBP1(S), organism-specific biosystem (from REACTOME)
      Activation of Chaperone Genes by XBP1(S), organism-specific biosystemXbp-1 (S) binds the sequence CCACG in ER Stress Responsive Elements (ERSE, consensus sequence CCAAT (N)9 CCACG) located upstream from many genes. The ubiquitous transcription factor NF-Y, a heterotri...
    • Activation of Chaperones by IRE1alpha, organism-specific biosystem (from REACTOME)
      Activation of Chaperones by IRE1alpha, organism-specific biosystemIRE1-alpha is a single-pass transmembrane protein that resides in the endoplasmic reticulum (ER) membrane. The C-terminus of IRE1-alpha is located in the cytosol; the N-terminus is located in the ER ...
    • Metabolism of proteins, organism-specific biosystem (from REACTOME)
      Metabolism of proteins, organism-specific biosystemProtein metabolism comprises the pathways of translation, post-translational modification and protein folding.
    • Protein processing in endoplasmic reticulum, organism-specific biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, organism-specific biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
    • Protein processing in endoplasmic reticulum, conserved biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, conserved biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
    • Unfolded Protein Response, organism-specific biosystem (from REACTOME)
      Unfolded Protein Response, organism-specific biosystemThe Unfolded Protein Response (UPR) is a regulatory system that protects the Endoplasmic Reticulum (ER) from overload. The UPR is provoked by the accumulation of improperly folded protein in the ER d...

    Markers

    Homology

    Clone Names

    • FLJ51211

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATPase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    activating transcription factor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    ubiquitin protein ligase binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    ER overload response IC
    Inferred by Curator
    more info
    PubMed 
    ER overload response TAS
    Traceable Author Statement
    more info
    PubMed 
    ER-associated protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    activation of signaling protein activity involved in unfolded protein response TAS
    Traceable Author Statement
    more info
     
    calcium ion homeostasis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cellular protein metabolic process TAS
    Traceable Author Statement
    more info
     
    endoplasmic reticulum calcium ion homeostasis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    endoplasmic reticulum unfolded protein response ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    endoplasmic reticulum unfolded protein response TAS
    Traceable Author Statement
    more info
     
    glucose homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    kidney development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of neuron apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of programmed cell death IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of sequence-specific DNA binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of type B pancreatic cell apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    neurological system process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    polyubiquitinated misfolded protein transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of calcium ion transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of protein metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of protein ubiquitination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of proteolysis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    protein maturation by protein folding IC
    Inferred by Curator
    more info
    PubMed 
    protein stabilization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of apoptotic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    renal water homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    response to endoplasmic reticulum stress IDA
    Inferred from Direct Assay
    more info
    PubMed 
    sensory perception of sound IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    visual perception IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    dendrite ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    endoplasmic reticulum membrane TAS
    Traceable Author Statement
    more info
     
    integral to endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011700.1 RefSeqGene

      Range
      5001..38416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001145853.1NP_001139325.1  wolframin

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) has an alternate splice site in the 5' UTR, resulting in a slightly shorter transcript, as compared to variant 1.
      Source sequence(s)
      AF084481, BC030130, Y18064
      Consensus CDS
      CCDS3386.1
      UniProtKB/Swiss-Prot
      O76024
      Related
      ENSP00000423337, OTTHUMP00000217278, ENST00000503569, OTTHUMT00000358733
    2. NM_006005.3NP_005996.2  wolframin

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) is the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AF084481, BC069213, Y18064
      Consensus CDS
      CCDS3386.1
      UniProtKB/Swiss-Prot
      O76024
      Related
      ENSP00000226760, OTTHUMP00000115499, ENST00000226760, OTTHUMT00000206863

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000004.11 Reference GRCh37.p10 Primary Assembly

      Range
      6271577..6304992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000136.1 Alternate HuRef

      Range
      6205316..6238436
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018915.1 Alternate CHM1_1.0

      Range
      6251682..6285088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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