U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CD53 CD53 molecule [ Pan troglodytes (chimpanzee) ]

Gene ID: 745007, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
CD53provided by VGNC
Official Full Name
CD53 moleculeprovided by VGNC
Primary source
VGNC:VGNC:10559
Locus tag
CK820_G0043694
See related
Ensembl:ENSPTRG00000001085
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (120298822..120328267, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (110971686..111000462)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene cyclin-T2-like Neighboring gene ligand dependent nuclear receptor interacting factor 1 Neighboring gene uncharacterized LOC129144205 Neighboring gene nuclear receptor-binding factor 2-like Neighboring gene olfactory receptor 1468-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
leukocyte surface antigen CD53
Names
CD53 antigen

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    120298822..120328267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063798500.1 → XP_063654570.1  leukocyte surface antigen CD53 isoform X2

  2. XM_003308334.5 → XP_003308382.1  leukocyte surface antigen CD53 isoform X1

    See identical proteins and their annotated locations for XP_003308382.1

    UniProtKB/TrEMBL
    A0A2J8JXE1, A0A6D2XBJ7, H2PZM7
    Related
    ENSPTRP00000001879.3
    Conserved Domains (2) summary
    cd03164
    Location:104 → 186
    CD53_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
    pfam00335
    Location:9 → 206
    Tetraspannin; Tetraspanin family

  3. XM_009429624.4 → XP_009427899.1  leukocyte surface antigen CD53 isoform X3

    Conserved Domains (2) summary
    cl02781
    Location:104 → 165
    tetraspanin_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the ...
    pfam00335
    Location:9 → 161
    Tetraspannin; Tetraspanin family

  4. XM_063798509.1 → XP_063654579.1  leukocyte surface antigen CD53 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous